Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
NR1H2P55055 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NR1H2P55055 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NR1H2P55055 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
NR1H2P55055 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NR1H2P55055 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NR1H2P55055 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NR1H2P55055 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.92■□□□□ 0.94
NR1H2P55055 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NR1H2P55055 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NR1H2P55055 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 ESRRAP2-201ENST00000418437 1549 ntBASIC20.91■□□□□ 0.94
NR1H2P55055 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.91■□□□□ 0.94
NR1H2P55055 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NR1H2P55055 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 AC103724.3-201ENST00000564481 992 ntBASIC20.91■□□□□ 0.94
NR1H2P55055 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NR1H2P55055 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NR1H2P55055 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NR1H2P55055 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H2P55055 LONRF2P2-201ENST00000439212 571 ntBASIC20.9■□□□□ 0.94
NR1H2P55055 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H2P55055 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NR1H2P55055 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H2P55055 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H2P55055 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NR1H2P55055 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NR1H2P55055 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NR1H2P55055 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NR1H2P55055 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NR1H2P55055 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.89■□□□□ 0.93
NR1H2P55055 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.89■□□□□ 0.93
NR1H2P55055 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.89■□□□□ 0.93
NR1H2P55055 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NR1H2P55055 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.88■□□□□ 0.93
NR1H2P55055 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NR1H2P55055 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NR1H2P55055 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.88■□□□□ 0.93
NR1H2P55055 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NR1H2P55055 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NR1H2P55055 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NR1H2P55055 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
NR1H2P55055 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NR1H2P55055 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.87■□□□□ 0.93
NR1H2P55055 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NR1H2P55055 AC022616.5-201ENST00000518796 181 ntBASIC20.87■□□□□ 0.93
NR1H2P55055 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.87■□□□□ 0.93
NR1H2P55055 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.87■□□□□ 0.93
NR1H2P55055 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NR1H2P55055 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.87■□□□□ 0.93
NR1H2P55055 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
NR1H2P55055 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms