Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 MRPL4YLR439W 960 nt3.68□□□□□ -1.82
SSU72P53538 FOL3YMR113W 1284 nt3.68□□□□□ -1.82
SSU72P53538 YIF1YNL263C 945 nt3.68□□□□□ -1.82
SSU72P53538 PHA2YNL316C 1005 nt3.68□□□□□ -1.82
SSU72P53538 HPR1YDR138W 2259 nt3.68□□□□□ -1.82
SSU72P53538 BOI2YER114C 3123 nt3.68□□□□□ -1.82
SSU72P53538 SOF1YLL011W 1470 nt3.67□□□□□ -1.82
SSU72P53538 PRM1YNL279W 1986 nt3.67□□□□□ -1.82
SSU72P53538 ALG6YOR002W 1635 nt3.67□□□□□ -1.82
SSU72P53538 TAF10YDR167W 621 nt3.67□□□□□ -1.82
SSU72P53538 NUP42YDR192C 1293 nt3.67□□□□□ -1.82
SSU72P53538 YJR112W-AYJR112W-A 330 nt3.67□□□□□ -1.82
SSU72P53538 YML053CYML053C 639 nt3.67□□□□□ -1.82
SSU72P53538 SAP30YMR263W 606 nt3.67□□□□□ -1.82
SSU72P53538 CWC25YNL245C 540 nt3.67□□□□□ -1.82
SSU72P53538 YOL035CYOL035C 303 nt3.67□□□□□ -1.82
SSU72P53538 FEX1YOR390W 1128 nt3.67□□□□□ -1.82
SSU72P53538 FEX2YPL279C 1128 nt3.67□□□□□ -1.82
SSU72P53538 PMC1YGL006W 3522 nt3.67□□□□□ -1.82
SSU72P53538 MAG2YLR427W 2013 nt3.66□□□□□ -1.82
SSU72P53538 SRO7YPR032W 3102 nt3.66□□□□□ -1.82
SSU72P53538 RAD57YDR004W 1383 nt3.66□□□□□ -1.82
SSU72P53538 YIL092WYIL092W 1902 nt3.66□□□□□ -1.82
SSU72P53538 HST1YOL068C 1512 nt3.66□□□□□ -1.82
SSU72P53538 PER1YCR044C 1074 nt3.66□□□□□ -1.82
SSU72P53538 ARF2YDL137W 546 nt3.66□□□□□ -1.82
SSU72P53538 PDX1YGR193C 1233 nt3.66□□□□□ -1.82
SSU72P53538 RIM4YHL024W 2142 nt3.66□□□□□ -1.82
SSU72P53538 NAT3YPR131C 588 nt3.66□□□□□ -1.82
SSU72P53538 MRPS9YBR146W 837 nt3.66□□□□□ -1.82
SSU72P53538 RGP1YDR137W 1992 nt3.65□□□□□ -1.82
SSU72P53538 YDL183CYDL183C 963 nt3.65□□□□□ -1.83
SSU72P53538 VMA22YHR060W 546 nt3.65□□□□□ -1.83
SSU72P53538 YIR043CYIR043C 693 nt3.65□□□□□ -1.83
SSU72P53538 TVP38YKR088C 1014 nt3.65□□□□□ -1.83
SSU72P53538 NKP2YLR315W 462 nt3.65□□□□□ -1.83
SSU72P53538 ALG5YPL227C 1005 nt3.65□□□□□ -1.83
SSU72P53538 PHO87YCR037C 2772 nt3.65□□□□□ -1.83
SSU72P53538 GLO3YER122C 1482 nt3.65□□□□□ -1.83
SSU72P53538 ATG2YNL242W 4779 nt3.65□□□□□ -1.83
SSU72P53538 ROK1YGL171W 1695 nt3.65□□□□□ -1.83
SSU72P53538 HOS2YGL194C 1359 nt3.64□□□□□ -1.83
SSU72P53538 NTH1YDR001C 2256 nt3.64□□□□□ -1.83
SSU72P53538 YER134CYER134C 537 nt3.64□□□□□ -1.83
SSU72P53538 JAC1YGL018C 555 nt3.64□□□□□ -1.83
SSU72P53538 tS(AGA)D3tS(AGA)D3 83 nt3.64□□□□□ -1.83
SSU72P53538 UIP3YAR027W 708 nt3.64□□□□□ -1.83
SSU72P53538 PNP1YLR209C 936 nt3.64□□□□□ -1.83
SSU72P53538 YMR147WYMR147W 672 nt3.64□□□□□ -1.83
SSU72P53538 snR17asnR17a 333 nt3.64□□□□□ -1.83
SSU72P53538 ATG14YBR128C 1035 nt3.64□□□□□ -1.83
SSU72P53538 YBR134WYBR134W 402 nt3.64□□□□□ -1.83
SSU72P53538 UMP1YBR173C 447 nt3.64□□□□□ -1.83
SSU72P53538 BUD27YFL023W 2391 nt3.64□□□□□ -1.83
SSU72P53538 MET4YNL103W 2019 nt3.64□□□□□ -1.83
SSU72P53538 NOC2YOR206W 2133 nt3.64□□□□□ -1.83
SSU72P53538 BUD8YLR353W 1812 nt3.63□□□□□ -1.83
SSU72P53538 TIP41YPR040W 1071 nt3.63□□□□□ -1.83
SSU72P53538 PAH1YMR165C 2589 nt3.63□□□□□ -1.83
SSU72P53538 DHH1YDL160C 1521 nt3.63□□□□□ -1.83
SSU72P53538 MAD3YJL013C 1548 nt3.63□□□□□ -1.83
SSU72P53538 GAD1YMR250W 1758 nt3.63□□□□□ -1.83
SSU72P53538 YBR138CYBR138C 1575 nt3.63□□□□□ -1.83
SSU72P53538 ARH1YDR376W 1482 nt3.62□□□□□ -1.83
SSU72P53538 ZPR1YGR211W 1461 nt3.62□□□□□ -1.83
SSU72P53538 NOP6YDL213C 678 nt3.62□□□□□ -1.83
SSU72P53538 YIL021C-AYIL021C-A 270 nt3.62□□□□□ -1.83
SSU72P53538 YIL165CYIL165C 360 nt3.62□□□□□ -1.83
SSU72P53538 SCD6YPR129W 1050 nt3.62□□□□□ -1.83
SSU72P53538 PEP5YMR231W 3090 nt3.61□□□□□ -1.83
SSU72P53538 NMD3YHR170W 1557 nt3.61□□□□□ -1.83
SSU72P53538 IMD2YHR216W 1572 nt3.61□□□□□ -1.83
SSU72P53538 YER145C-AYER145C-A 438 nt3.61□□□□□ -1.83
SSU72P53538 MRPL24YMR193W 777 nt3.61□□□□□ -1.83
SSU72P53538 AST1YBL069W 1290 nt3.61□□□□□ -1.83
SSU72P53538 TIF5YPR041W 1218 nt3.61□□□□□ -1.83
SSU72P53538 PRE2YPR103W 864 nt3.61□□□□□ -1.83
SSU72P53538 YPR150WYPR150W 522 nt3.61□□□□□ -1.83
SSU72P53538 WHI4YDL224C 1950 nt3.61□□□□□ -1.83
SSU72P53538 MLF3YNL074C 1359 nt3.61□□□□□ -1.83
SSU72P53538 APM1YPL259C 1428 nt3.61□□□□□ -1.83
SSU72P53538 CYM1YDR430C 2970 nt3.6□□□□□ -1.83
SSU72P53538 LSB1YGR136W 726 nt3.6□□□□□ -1.83
SSU72P53538 SPC42YKL042W 1092 nt3.6□□□□□ -1.83
SSU72P53538 FBP1YLR377C 1047 nt3.6□□□□□ -1.83
SSU72P53538 REH1YLR387C 1299 nt3.6□□□□□ -1.83
SSU72P53538 SNF8YPL002C 702 nt3.6□□□□□ -1.83
SSU72P53538 PIM1YBL022C 3402 nt3.6□□□□□ -1.83
SSU72P53538 NOP58YOR310C 1536 nt3.6□□□□□ -1.83
SSU72P53538 ARX1YDR101C 1782 nt3.59□□□□□ -1.83
SSU72P53538 YDL012CYDL012C 324 nt3.59□□□□□ -1.83
SSU72P53538 YGL193CYGL193C 312 nt3.59□□□□□ -1.83
SSU72P53538 YIL152WYIL152W 708 nt3.59□□□□□ -1.83
SSU72P53538 MRS3YJL133W 945 nt3.59□□□□□ -1.83
SSU72P53538 YJR012CYJR012C 624 nt3.59□□□□□ -1.83
SSU72P53538 COA2YPL189C-A 207 nt3.59□□□□□ -1.83
SSU72P53538 REI1YBR267W 1182 nt3.59□□□□□ -1.83
SSU72P53538 YDR132CYDR132C 1488 nt3.59□□□□□ -1.84
SSU72P53538 YMR221CYMR221C 1515 nt3.59□□□□□ -1.84
SSU72P53538 ALG9YNL219C 1668 nt3.59□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms