Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.38■□□□□ 0.85
HMGA2P52926 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGA2P52926 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.38■□□□□ 0.85
HMGA2P52926 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
HMGA2P52926 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HMGA2P52926 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGA2P52926 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 PVT1_1.1-201ENST00000615125 194 ntBASIC20.37■□□□□ 0.85
HMGA2P52926 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGA2P52926 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.37■□□□□ 0.85
HMGA2P52926 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA2P52926 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA2P52926 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA2P52926 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGA2P52926 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA2P52926 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA2P52926 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA2P52926 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA2P52926 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA2P52926 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMGA2P52926 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA2P52926 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA2P52926 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA2P52926 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HMGA2P52926 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGA2P52926 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGA2P52926 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGA2P52926 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGA2P52926 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA2P52926 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGA2P52926 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGA2P52926 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGA2P52926 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HMGA2P52926 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMGA2P52926 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGA2P52926 NTF6A-201ENST00000591175 560 ntBASIC20.33■□□□□ 0.85
HMGA2P52926 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.33■□□□□ 0.84
HMGA2P52926 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA2P52926 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGA2P52926 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HMGA2P52926 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGA2P52926 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGA2P52926 BHLHE23-202ENST00000612929 1109 ntBASIC20.32■□□□□ 0.84
HMGA2P52926 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA2P52926 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HMGA2P52926 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGA2P52926 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGA2P52926 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HMGA2P52926 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HMGA2P52926 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGA2P52926 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGA2P52926 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HMGA2P52926 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMGA2P52926 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 FP325331.1-202ENST00000623531 1380 ntBASIC20.31■□□□□ 0.84
HMGA2P52926 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA2P52926 FBXW4P1-201ENST00000426721 2239 ntBASIC20.3■□□□□ 0.84
HMGA2P52926 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 SNX5-217ENST00000606557 1087 ntBASIC20.3■□□□□ 0.84
HMGA2P52926 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
HMGA2P52926 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA2P52926 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA2P52926 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA2P52926 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA2P52926 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA2P52926 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA2P52926 ABHD17AP5-201ENST00000580133 923 ntBASIC20.29■□□□□ 0.84
HMGA2P52926 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA2P52926 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA2P52926 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 599.7 ms