Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HUL4YJR036C 2679 nt3.06□□□□□ -1.92
VPS55P47111 PPZ1YML016C 2079 nt3.06□□□□□ -1.92
VPS55P47111 STB2YMR053C 2553 nt3.06□□□□□ -1.92
VPS55P47111 AIP1YMR092C 1848 nt3.06□□□□□ -1.92
VPS55P47111 BIK1YCL029C 1323 nt3.06□□□□□ -1.92
VPS55P47111 ZDS1YMR273C 2748 nt3.06□□□□□ -1.92
VPS55P47111 FAR8YMR029C 1572 nt3.05□□□□□ -1.92
VPS55P47111 SSL1YLR005W 1386 nt3.05□□□□□ -1.92
VPS55P47111 GCV1YDR019C 1203 nt3.05□□□□□ -1.92
VPS55P47111 MSW1YDR268W 1140 nt3.05□□□□□ -1.92
VPS55P47111 ASP1YDR321W 1146 nt3.05□□□□□ -1.92
VPS55P47111 YER133W-AYER133W-A 342 nt3.05□□□□□ -1.92
VPS55P47111 TAF11YML015C 1041 nt3.05□□□□□ -1.92
VPS55P47111 RFA2YNL312W 822 nt3.05□□□□□ -1.92
VPS55P47111 YGL140CYGL140C 3660 nt3.05□□□□□ -1.92
VPS55P47111 MSS116YDR194C 1995 nt3.05□□□□□ -1.92
VPS55P47111 YML020WYML020W 1995 nt3.05□□□□□ -1.92
VPS55P47111 OSH2YDL019C 3852 nt3.05□□□□□ -1.92
VPS55P47111 KIP3YGL216W 2418 nt3.04□□□□□ -1.92
VPS55P47111 MAG1YER142C 891 nt3.04□□□□□ -1.92
VPS55P47111 IDP2YLR174W 1239 nt3.04□□□□□ -1.92
VPS55P47111 FLD1YLR404W 858 nt3.04□□□□□ -1.92
VPS55P47111 YBL036CYBL036C 774 nt3.04□□□□□ -1.92
VPS55P47111 ASC1YMR116C 960 nt3.04□□□□□ -1.92
VPS55P47111 REX4YOL080C 870 nt3.04□□□□□ -1.92
VPS55P47111 NCE102YPR149W 522 nt3.04□□□□□ -1.92
VPS55P47111 AIM21YIR003W 2040 nt3.03□□□□□ -1.92
VPS55P47111 HCA4YJL033W 2313 nt3.03□□□□□ -1.92
VPS55P47111 HIS6YIL020C 786 nt3.03□□□□□ -1.92
VPS55P47111 YJR112W-AYJR112W-A 330 nt3.03□□□□□ -1.92
VPS55P47111 YMR114CYMR114C 1107 nt3.03□□□□□ -1.92
VPS55P47111 YBL059WYBL059W 582 nt3.03□□□□□ -1.92
VPS55P47111 ASI2YNL159C 870 nt3.03□□□□□ -1.92
VPS55P47111 YPL041CYPL041C 624 nt3.03□□□□□ -1.92
VPS55P47111 ELC1YPL046C 300 nt3.03□□□□□ -1.92
VPS55P47111 MCM7YBR202W 2538 nt3.03□□□□□ -1.92
VPS55P47111 SIS2YKR072C 1689 nt3.03□□□□□ -1.92
VPS55P47111 MLH2YLR035C 2088 nt3.03□□□□□ -1.92
VPS55P47111 SRP72YPL210C 1923 nt3.03□□□□□ -1.92
VPS55P47111 RSC3YDR303C 2658 nt3.03□□□□□ -1.92
VPS55P47111 ATG1YGL180W 2694 nt3.03□□□□□ -1.92
VPS55P47111 IDS2YJL146W 1410 nt3.02□□□□□ -1.93
VPS55P47111 PHO87YCR037C 2772 nt3.02□□□□□ -1.93
VPS55P47111 LTV1YKL143W 1392 nt3.02□□□□□ -1.93
VPS55P47111 HCM1YCR065W 1695 nt3.02□□□□□ -1.93
VPS55P47111 TRM8YDL201W 861 nt3.02□□□□□ -1.93
VPS55P47111 IES6YEL044W 501 nt3.02□□□□□ -1.93
VPS55P47111 YGL152CYGL152C 678 nt3.02□□□□□ -1.93
VPS55P47111 SRB5YGR104C 924 nt3.02□□□□□ -1.93
VPS55P47111 AAD10YJR155W 867 nt3.02□□□□□ -1.93
VPS55P47111 SRP40YKR092C 1221 nt3.02□□□□□ -1.93
VPS55P47111 RSF1YMR030W 1131 nt3.02□□□□□ -1.93
VPS55P47111 NIS1YNL078W 1224 nt3.02□□□□□ -1.93
VPS55P47111 FSH3YOR280C 801 nt3.02□□□□□ -1.93
VPS55P47111 RMI1YPL024W 726 nt3.02□□□□□ -1.93
VPS55P47111 GDT1YBR187W 843 nt3.02□□□□□ -1.93
VPS55P47111 ARH1YDR376W 1482 nt3.02□□□□□ -1.93
VPS55P47111 ECM32YER176W 3366 nt3.01□□□□□ -1.93
VPS55P47111 RPS0AYGR214W 759 nt3.01□□□□□ -1.93
VPS55P47111 ELF1YKL160W 438 nt3.01□□□□□ -1.93
VPS55P47111 NRK1YNL129W 723 nt3.01□□□□□ -1.93
VPS55P47111 PPQ1YPL179W 1650 nt3.01□□□□□ -1.93
VPS55P47111 NCR1YPL006W 3513 nt3.01□□□□□ -1.93
VPS55P47111 SWH1YAR042W 3567 nt3□□□□□ -1.93
VPS55P47111 NVJ1YHR195W 966 nt3□□□□□ -1.93
VPS55P47111 BNA1YJR025C 534 nt3□□□□□ -1.93
VPS55P47111 BAT2YJR148W 1131 nt3□□□□□ -1.93
VPS55P47111 MCM1YMR043W 861 nt3□□□□□ -1.93
VPS55P47111 UTP23YOR004W 765 nt3□□□□□ -1.93
VPS55P47111 YPL162CYPL162C 822 nt3□□□□□ -1.93
VPS55P47111 MRPS9YBR146W 837 nt3□□□□□ -1.93
VPS55P47111 STU1YBL034C 4542 nt3□□□□□ -1.93
VPS55P47111 TRE1YPL176C 2352 nt3□□□□□ -1.93
VPS55P47111 NUP159YIL115C 4383 nt2.99□□□□□ -1.93
VPS55P47111 ZRC1YMR243C 1329 nt2.99□□□□□ -1.93
VPS55P47111 PRM7YDL039C 2097 nt2.99□□□□□ -1.93
VPS55P47111 RPP1AYDL081C 321 nt2.99□□□□□ -1.93
VPS55P47111 YLR125WYLR125W 411 nt2.99□□□□□ -1.93
VPS55P47111 FYV5YCL058C 459 nt2.99□□□□□ -1.93
VPS55P47111 XRS2YDR369C 2565 nt2.99□□□□□ -1.93
VPS55P47111 ROD1YOR018W 2514 nt2.98□□□□□ -1.93
VPS55P47111 IOC2YLR095C 2439 nt2.98□□□□□ -1.93
VPS55P47111 NOG1YPL093W 1944 nt2.98□□□□□ -1.93
VPS55P47111 YCR085WYCR085W 354 nt2.98□□□□□ -1.93
VPS55P47111 REC104YHR157W 549 nt2.98□□□□□ -1.93
VPS55P47111 CWC25YNL245C 540 nt2.98□□□□□ -1.93
VPS55P47111 COP1YDL145C 3606 nt2.98□□□□□ -1.93
VPS55P47111 SSU1YPL092W 1377 nt2.98□□□□□ -1.93
VPS55P47111 PRP19YLL036C 1512 nt2.98□□□□□ -1.93
VPS55P47111 PRT1YOR361C 2292 nt2.98□□□□□ -1.93
VPS55P47111 KRI1YNL308C 1776 nt2.97□□□□□ -1.93
VPS55P47111 BSC5YNR069C 1470 nt2.97□□□□□ -1.93
VPS55P47111 YDR526CYDR526C 471 nt2.97□□□□□ -1.93
VPS55P47111 YER034WYER034W 558 nt2.97□□□□□ -1.93
VPS55P47111 PMT5YDL093W 2232 nt2.97□□□□□ -1.93
VPS55P47111 YHR177WYHR177W 1362 nt2.97□□□□□ -1.93
VPS55P47111 ERG5YMR015C 1617 nt2.97□□□□□ -1.93
VPS55P47111 AVT7YIL088C 1473 nt2.96□□□□□ -1.93
VPS55P47111 DHR2YKL078W 2208 nt2.96□□□□□ -1.94
VPS55P47111 ELM1YKL048C 1923 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 20.1 ms