Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 YLR156WYLR156W 345 nt3.69□□□□□ -1.82
LSM4P40070 YLR159WYLR159W 345 nt3.69□□□□□ -1.82
LSM4P40070 YLR161WYLR161W 345 nt3.69□□□□□ -1.82
LSM4P40070 YBL006W-AYBL006W-A 150 nt3.69□□□□□ -1.82
LSM4P40070 SLZ1YNL196C 897 nt3.69□□□□□ -1.82
LSM4P40070 PWR1PWR1 941 nt3.69□□□□□ -1.82
LSM4P40070 SRB6YBR253W 366 nt3.69□□□□□ -1.82
LSM4P40070 FAR10YLR238W 1437 nt3.69□□□□□ -1.82
LSM4P40070 LAP2YNL045W 2016 nt3.68□□□□□ -1.82
LSM4P40070 GAS5YOL030W 1455 nt3.68□□□□□ -1.82
LSM4P40070 CDC10YCR002C 969 nt3.68□□□□□ -1.82
LSM4P40070 COS4YFL062W 1140 nt3.68□□□□□ -1.82
LSM4P40070 YIL163CYIL163C 354 nt3.68□□□□□ -1.82
LSM4P40070 COS3YML132W 1140 nt3.68□□□□□ -1.82
LSM4P40070 RSF1YMR030W 1131 nt3.68□□□□□ -1.82
LSM4P40070 HEM15YOR176W 1182 nt3.68□□□□□ -1.82
LSM4P40070 SUA7YPR086W 1038 nt3.68□□□□□ -1.82
LSM4P40070 YPR169W-AYPR169W-A 219 nt3.68□□□□□ -1.82
LSM4P40070 YPR170W-BYPR170W-B 258 nt3.68□□□□□ -1.82
LSM4P40070 COS2YBR302C 1140 nt3.68□□□□□ -1.82
LSM4P40070 ADP1YCR011C 3150 nt3.68□□□□□ -1.82
LSM4P40070 MET12YPL023C 1974 nt3.67□□□□□ -1.82
LSM4P40070 ABP140YOR239W 1887 nt3.67□□□□□ -1.82
LSM4P40070 CWC2YDL209C 1020 nt3.67□□□□□ -1.82
LSM4P40070 DCD1YHR144C 939 nt3.67□□□□□ -1.82
LSM4P40070 YIL165CYIL165C 360 nt3.67□□□□□ -1.82
LSM4P40070 YJR112W-AYJR112W-A 330 nt3.67□□□□□ -1.82
LSM4P40070 MRPL3YMR024W 1173 nt3.67□□□□□ -1.82
LSM4P40070 YMR130WYMR130W 909 nt3.67□□□□□ -1.82
LSM4P40070 RET3YPL010W 570 nt3.67□□□□□ -1.82
LSM4P40070 YPR174CYPR174C 666 nt3.67□□□□□ -1.82
LSM4P40070 IOC2YLR095C 2439 nt3.67□□□□□ -1.82
LSM4P40070 EMP47YFL048C 1338 nt3.67□□□□□ -1.82
LSM4P40070 BIK1YCL029C 1323 nt3.67□□□□□ -1.82
LSM4P40070 ARH1YDR376W 1482 nt3.67□□□□□ -1.82
LSM4P40070 SSH1YBR283C 1473 nt3.67□□□□□ -1.82
LSM4P40070 AIM21YIR003W 2040 nt3.66□□□□□ -1.82
LSM4P40070 FMP25YLR077W 1752 nt3.66□□□□□ -1.82
LSM4P40070 NTA1YJR062C 1374 nt3.66□□□□□ -1.82
LSM4P40070 HCM1YCR065W 1695 nt3.66□□□□□ -1.82
LSM4P40070 RPP1AYDL081C 321 nt3.66□□□□□ -1.82
LSM4P40070 SOL4YGR248W 768 nt3.66□□□□□ -1.82
LSM4P40070 OAR1YKL055C 837 nt3.66□□□□□ -1.82
LSM4P40070 PML1YLR016C 615 nt3.66□□□□□ -1.82
LSM4P40070 POL12YBL035C 2118 nt3.66□□□□□ -1.82
LSM4P40070 RFA2YNL312W 822 nt3.66□□□□□ -1.82
LSM4P40070 KTR7YIL085C 1554 nt3.66□□□□□ -1.82
LSM4P40070 KGD1YIL125W 3045 nt3.66□□□□□ -1.82
LSM4P40070 ADY3YDL239C 2373 nt3.66□□□□□ -1.82
LSM4P40070 UBC1YDR177W 648 nt3.65□□□□□ -1.83
LSM4P40070 EAF5YEL018W 840 nt3.65□□□□□ -1.83
LSM4P40070 RNA15YGL044C 891 nt3.65□□□□□ -1.83
LSM4P40070 RPL43BYJR094W-A 279 nt3.65□□□□□ -1.83
LSM4P40070 SRP40YKR092C 1221 nt3.65□□□□□ -1.83
LSM4P40070 IDI1YPL117C 867 nt3.65□□□□□ -1.83
LSM4P40070 MET16YPR167C 786 nt3.65□□□□□ -1.83
LSM4P40070 YBR219CYBR219C 384 nt3.65□□□□□ -1.83
LSM4P40070 RER1YCL001W 567 nt3.65□□□□□ -1.83
LSM4P40070 CBF5YLR175W 1452 nt3.65□□□□□ -1.83
LSM4P40070 MSC2YDR205W 2175 nt3.65□□□□□ -1.83
LSM4P40070 YER077CYER077C 2067 nt3.64□□□□□ -1.83
LSM4P40070 YDR445CYDR445C 408 nt3.64□□□□□ -1.83
LSM4P40070 YER145C-AYER145C-A 438 nt3.64□□□□□ -1.83
LSM4P40070 BUD13YGL174W 801 nt3.64□□□□□ -1.83
LSM4P40070 SWP1YMR149W 861 nt3.64□□□□□ -1.83
LSM4P40070 GPI10YGL142C 1851 nt3.64□□□□□ -1.83
LSM4P40070 ALG6YOR002W 1635 nt3.63□□□□□ -1.83
LSM4P40070 MRS2YOR334W 1413 nt3.63□□□□□ -1.83
LSM4P40070 RSC3YDR303C 2658 nt3.63□□□□□ -1.83
LSM4P40070 DAS2YDR020C 699 nt3.63□□□□□ -1.83
LSM4P40070 GLC3YEL011W 2115 nt3.63□□□□□ -1.83
LSM4P40070 YGR011WYGR011W 327 nt3.63□□□□□ -1.83
LSM4P40070 MIC26YGR235C 702 nt3.63□□□□□ -1.83
LSM4P40070 YLR036CYLR036C 612 nt3.63□□□□□ -1.83
LSM4P40070 NKP2YLR315W 462 nt3.63□□□□□ -1.83
LSM4P40070 RPS1BYML063W 768 nt3.63□□□□□ -1.83
LSM4P40070 SUL2YLR092W 2682 nt3.63□□□□□ -1.83
LSM4P40070 NMD3YHR170W 1557 nt3.63□□□□□ -1.83
LSM4P40070 EKI1YDR147W 1605 nt3.62□□□□□ -1.83
LSM4P40070 RTC1YOL138C 4026 nt3.62□□□□□ -1.83
LSM4P40070 RDH54YBR073W 2877 nt3.62□□□□□ -1.83
LSM4P40070 tS(AGA)D3tS(AGA)D3 83 nt3.62□□□□□ -1.83
LSM4P40070 NSE1YLR007W 1011 nt3.62□□□□□ -1.83
LSM4P40070 IDP2YLR174W 1239 nt3.62□□□□□ -1.83
LSM4P40070 RAD17YOR368W 1206 nt3.62□□□□□ -1.83
LSM4P40070 YPL162CYPL162C 822 nt3.62□□□□□ -1.83
LSM4P40070 MRPS9YBR146W 837 nt3.62□□□□□ -1.83
LSM4P40070 STP22YCL008C 1158 nt3.62□□□□□ -1.83
LSM4P40070 IMD2YHR216W 1572 nt3.62□□□□□ -1.83
LSM4P40070 RIM4YHL024W 2142 nt3.62□□□□□ -1.83
LSM4P40070 TPA1YER049W 1935 nt3.62□□□□□ -1.83
LSM4P40070 PDR12YPL058C 4536 nt3.61□□□□□ -1.83
LSM4P40070 TIF34YMR146C 1044 nt3.61□□□□□ -1.83
LSM4P40070 PBN1YCL052C 1251 nt3.61□□□□□ -1.83
LSM4P40070 YPR003CYPR003C 2265 nt3.61□□□□□ -1.83
LSM4P40070 FLO8YER109C 2400 nt3.61□□□□□ -1.83
LSM4P40070 TFA1YKL028W 1449 nt3.61□□□□□ -1.83
LSM4P40070 UBP6YFR010W 1500 nt3.6□□□□□ -1.83
LSM4P40070 PRP19YLL036C 1512 nt3.6□□□□□ -1.83
LSM4P40070 YEL009C-AYEL009C-A 408 nt3.6□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms