Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 RUF22RUF22 515 nt5.75□□□□□ -1.49
PEX28P38848 UAF30YOR295W 687 nt5.75□□□□□ -1.49
PEX28P38848 YOR318CYOR318C 306 nt5.75□□□□□ -1.49
PEX28P38848 YHR202WYHR202W 1809 nt5.75□□□□□ -1.49
PEX28P38848 VHT1YGR065C 1782 nt5.75□□□□□ -1.49
PEX28P38848 DIA3YDL024C 1407 nt5.74□□□□□ -1.49
PEX28P38848 MEC3YLR288C 1425 nt5.74□□□□□ -1.49
PEX28P38848 PDS1YDR113C 1122 nt5.74□□□□□ -1.49
PEX28P38848 COX26YDR119W-A 201 nt5.74□□□□□ -1.49
PEX28P38848 MPO1YGL010W 525 nt5.74□□□□□ -1.49
PEX28P38848 CIS3YJL158C 684 nt5.74□□□□□ -1.49
PEX28P38848 YKL162CYKL162C 1209 nt5.74□□□□□ -1.49
PEX28P38848 YIM1YMR152W 1098 nt5.74□□□□□ -1.49
PEX28P38848 YBR219CYBR219C 384 nt5.74□□□□□ -1.49
PEX28P38848 KTR7YIL085C 1554 nt5.74□□□□□ -1.49
PEX28P38848 MIC60YKR016W 1623 nt5.74□□□□□ -1.49
PEX28P38848 NOP58YOR310C 1536 nt5.74□□□□□ -1.49
PEX28P38848 GGA1YDR358W 1674 nt5.73□□□□□ -1.49
PEX28P38848 EFG1YGR271C-A 702 nt5.73□□□□□ -1.49
PEX28P38848 NRK1YNL129W 723 nt5.73□□□□□ -1.49
PEX28P38848 YNR061CYNR061C 660 nt5.73□□□□□ -1.49
PEX28P38848 GPM3YOL056W 912 nt5.73□□□□□ -1.49
PEX28P38848 FIG1YBR040W 897 nt5.73□□□□□ -1.49
PEX28P38848 YBR196C-BYBR196C-B 105 nt5.73□□□□□ -1.49
PEX28P38848 UTP5YDR398W 1932 nt5.73□□□□□ -1.49
PEX28P38848 FOB1YDR110W 1701 nt5.73□□□□□ -1.49
PEX28P38848 COT1YOR316C 1320 nt5.73□□□□□ -1.49
PEX28P38848 SEO1YAL067C 1782 nt5.72□□□□□ -1.49
PEX28P38848 MMP1YLL061W 1752 nt5.72□□□□□ -1.49
PEX28P38848 YME1YPR024W 2244 nt5.72□□□□□ -1.49
PEX28P38848 YDR396WYDR396W 501 nt5.72□□□□□ -1.49
PEX28P38848 EMC4YGL231C 573 nt5.72□□□□□ -1.49
PEX28P38848 YMR085WYMR085W 1299 nt5.72□□□□□ -1.49
PEX28P38848 RPC34YNR003C 954 nt5.72□□□□□ -1.49
PEX28P38848 YOL097W-AYOL097W-A 186 nt5.72□□□□□ -1.49
PEX28P38848 ATG5YPL149W 885 nt5.72□□□□□ -1.49
PEX28P38848 RPN7YPR108W 1290 nt5.72□□□□□ -1.49
PEX28P38848 RGP1YDR137W 1992 nt5.72□□□□□ -1.49
PEX28P38848 STR2YJR130C 1920 nt5.72□□□□□ -1.49
PEX28P38848 PCI8YIL071C 1335 nt5.72□□□□□ -1.49
PEX28P38848 YNR066CYNR066C 1311 nt5.72□□□□□ -1.49
PEX28P38848 MPH2YDL247W 1830 nt5.71□□□□□ -1.49
PEX28P38848 APM2YHL019C 1818 nt5.71□□□□□ -1.49
PEX28P38848 TEL2YGR099W 2067 nt5.71□□□□□ -1.49
PEX28P38848 RGD1YBR260C 2001 nt5.71□□□□□ -1.5
PEX28P38848 YIL001WYIL001W 1542 nt5.71□□□□□ -1.5
PEX28P38848 COX9YDL067C 180 nt5.71□□□□□ -1.5
PEX28P38848 YFR009W-AYFR009W-A 258 nt5.71□□□□□ -1.5
PEX28P38848 NPY1YGL067W 1155 nt5.71□□□□□ -1.5
PEX28P38848 YGL204CYGL204C 306 nt5.71□□□□□ -1.5
PEX28P38848 DUS4YLR405W 1104 nt5.71□□□□□ -1.5
PEX28P38848 MRPL17YNL252C 846 nt5.71□□□□□ -1.5
PEX28P38848 BUD21YOR078W 645 nt5.71□□□□□ -1.5
PEX28P38848 FDH2YPL275W 711 nt5.71□□□□□ -1.5
PEX28P38848 CLB1YGR108W 1416 nt5.71□□□□□ -1.5
PEX28P38848 SLI1YGR212W 1407 nt5.71□□□□□ -1.5
PEX28P38848 AAP1YHR047C 2571 nt5.7□□□□□ -1.5
PEX28P38848 YIG1YPL201C 1386 nt5.7□□□□□ -1.5
PEX28P38848 UTR4YEL038W 684 nt5.7□□□□□ -1.5
PEX28P38848 AIM25YJR100C 984 nt5.7□□□□□ -1.5
PEX28P38848 NYV1YLR093C 762 nt5.7□□□□□ -1.5
PEX28P38848 SEC14YMR079W 915 nt5.7□□□□□ -1.5
PEX28P38848 ERD2YBL040C 660 nt5.7□□□□□ -1.5
PEX28P38848 MAP2YBL091C 1266 nt5.7□□□□□ -1.5
PEX28P38848 VPS21YOR089C 633 nt5.7□□□□□ -1.5
PEX28P38848 PDX3YBR035C 687 nt5.7□□□□□ -1.5
PEX28P38848 CMR3YPR013C 954 nt5.7□□□□□ -1.5
PEX28P38848 FAT3YKL187C 2253 nt5.7□□□□□ -1.5
PEX28P38848 RCK2YLR248W 1833 nt5.69□□□□□ -1.5
PEX28P38848 YAP6YDR259C 1152 nt5.69□□□□□ -1.5
PEX28P38848 PRP18YGR006W 756 nt5.69□□□□□ -1.5
PEX28P38848 PUS6YGR169C 1215 nt5.69□□□□□ -1.5
PEX28P38848 PFK27YOL136C 1194 nt5.69□□□□□ -1.5
PEX28P38848 SUR1YPL057C 1149 nt5.69□□□□□ -1.5
PEX28P38848 CUP9YPL177C 921 nt5.69□□□□□ -1.5
PEX28P38848 MAL12YGR292W 1755 nt5.69□□□□□ -1.5
PEX28P38848 MAL32YBR299W 1755 nt5.69□□□□□ -1.5
PEX28P38848 VID30YGL227W 2877 nt5.69□□□□□ -1.5
PEX28P38848 YDL034WYDL034W 345 nt5.68□□□□□ -1.5
PEX28P38848 OST5YGL226C-A 261 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)CtN(GUU)C 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)FtN(GUU)F 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)GtN(GUU)G 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)KtN(GUU)K 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)LtN(GUU)L 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)N1tN(GUU)N1 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)N2tN(GUU)N2 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)O1tN(GUU)O1 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)O2tN(GUU)O2 74 nt5.68□□□□□ -1.5
PEX28P38848 tN(GUU)PtN(GUU)P 74 nt5.68□□□□□ -1.5
PEX28P38848 YHR127WYHR127W 732 nt5.68□□□□□ -1.5
PEX28P38848 SUP2tY(GUA)D 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP11tY(GUA)F1 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP6tY(GUA)F2 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP7tY(GUA)J1 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP4tY(GUA)J2 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP5tY(GUA)M1 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP8tY(GUA)M2 75 nt5.68□□□□□ -1.5
PEX28P38848 SUP3tY(GUA)O 75 nt5.68□□□□□ -1.5
PEX28P38848 GLG2YJL137C 1143 nt5.68□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms