Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.62■■□□□ 1.05
EPHA3P29320 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
EPHA3P29320 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.62■■□□□ 1.05
EPHA3P29320 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
EPHA3P29320 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.62■■□□□ 1.05
EPHA3P29320 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.62■■□□□ 1.05
EPHA3P29320 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.62■■□□□ 1.05
EPHA3P29320 DUX4L18-201ENST00000553347 1267 ntBASIC21.62■■□□□ 1.05
EPHA3P29320 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
EPHA3P29320 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EPHA3P29320 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
EPHA3P29320 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EPHA3P29320 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
EPHA3P29320 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
EPHA3P29320 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
EPHA3P29320 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA3P29320 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.61■■□□□ 1.05
EPHA3P29320 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
EPHA3P29320 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
EPHA3P29320 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.6■■□□□ 1.05
EPHA3P29320 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
EPHA3P29320 AC004448.1-201ENST00000458332 883 ntBASIC21.6■■□□□ 1.05
EPHA3P29320 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EPHA3P29320 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
EPHA3P29320 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
EPHA3P29320 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.6■■□□□ 1.05
EPHA3P29320 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
EPHA3P29320 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
EPHA3P29320 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.59■■□□□ 1.05
EPHA3P29320 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.59■■□□□ 1.05
EPHA3P29320 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EPHA3P29320 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.59■■□□□ 1.05
EPHA3P29320 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
EPHA3P29320 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.58■■□□□ 1.05
EPHA3P29320 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
EPHA3P29320 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.58■■□□□ 1.05
EPHA3P29320 MIR4281-201ENST00000580852 62 ntBASIC21.58■■□□□ 1.05
EPHA3P29320 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
EPHA3P29320 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EPHA3P29320 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
EPHA3P29320 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.58■■□□□ 1.04
EPHA3P29320 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EPHA3P29320 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA3P29320 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.57■■□□□ 1.04
EPHA3P29320 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
EPHA3P29320 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA3P29320 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
EPHA3P29320 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA3P29320 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EPHA3P29320 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.57■■□□□ 1.04
EPHA3P29320 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 FBXW4P1-201ENST00000426721 2239 ntBASIC21.56■■□□□ 1.04
EPHA3P29320 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
EPHA3P29320 AC087742.1-201ENST00000575880 1738 ntBASIC21.56■■□□□ 1.04
EPHA3P29320 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
EPHA3P29320 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
EPHA3P29320 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.56■■□□□ 1.04
EPHA3P29320 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.56■■□□□ 1.04
EPHA3P29320 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.55■■□□□ 1.04
EPHA3P29320 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.55■■□□□ 1.04
EPHA3P29320 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EPHA3P29320 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EPHA3P29320 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
EPHA3P29320 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
EPHA3P29320 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
EPHA3P29320 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.54■■□□□ 1.04
EPHA3P29320 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EPHA3P29320 HSD17B1P1-201ENST00000590052 955 ntBASIC21.54■■□□□ 1.04
EPHA3P29320 THA1P-201ENST00000590384 1145 ntBASIC21.54■■□□□ 1.04
EPHA3P29320 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
EPHA3P29320 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EPHA3P29320 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms