Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.69■□□□□ 0.58
LMO1P25800 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO1P25800 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LMO1P25800 LINC01529-204ENST00000636474 1715 ntBASIC18.69■□□□□ 0.58
LMO1P25800 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 AC233723.2-201ENST00000623798 2106 ntBASIC18.68■□□□□ 0.58
LMO1P25800 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO1P25800 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
LMO1P25800 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
LMO1P25800 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LMO1P25800 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
LMO1P25800 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.67■□□□□ 0.58
LMO1P25800 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
LMO1P25800 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
LMO1P25800 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.67■□□□□ 0.58
LMO1P25800 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LMO1P25800 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LMO1P25800 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.66■□□□□ 0.58
LMO1P25800 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
LMO1P25800 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 TSPY9P-201ENST00000440215 945 ntBASIC18.66■□□□□ 0.58
LMO1P25800 TSPY11P-201ENST00000442607 1045 ntBASIC18.66■□□□□ 0.58
LMO1P25800 UNC93B8-201ENST00000511903 705 ntBASIC18.66■□□□□ 0.58
LMO1P25800 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.66■□□□□ 0.58
LMO1P25800 AL035685.1-201ENST00000636663 812 ntBASIC18.66■□□□□ 0.58
LMO1P25800 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LMO1P25800 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 AC009102.2-201ENST00000606772 1639 ntBASIC18.66■□□□□ 0.58
LMO1P25800 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
LMO1P25800 C1orf229-201ENST00000623686 2258 ntBASIC18.66■□□□□ 0.58
LMO1P25800 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LMO1P25800 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO1P25800 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.65■□□□□ 0.58
LMO1P25800 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LMO1P25800 AC137767.1-201ENST00000602918 1920 ntBASIC18.65■□□□□ 0.58
LMO1P25800 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.65■□□□□ 0.58
LMO1P25800 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO1P25800 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.65■□□□□ 0.58
LMO1P25800 DUX4L4-201ENST00000566884 1269 ntBASIC18.65■□□□□ 0.58
LMO1P25800 MIR6724-1-201ENST00000616420 92 ntBASIC18.65■□□□□ 0.58
LMO1P25800 MIR6724-2-201ENST00000616483 92 ntBASIC18.65■□□□□ 0.58
LMO1P25800 MIR6724-4-201ENST00000617390 92 ntBASIC18.65■□□□□ 0.58
LMO1P25800 MIR6724-3-201ENST00000622482 92 ntBASIC18.65■□□□□ 0.58
LMO1P25800 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO1P25800 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LMO1P25800 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
LMO1P25800 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.64■□□□□ 0.58
LMO1P25800 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LMO1P25800 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LMO1P25800 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.64■□□□□ 0.57
LMO1P25800 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LMO1P25800 ESRRAP2-201ENST00000418437 1549 ntBASIC18.64■□□□□ 0.57
LMO1P25800 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LMO1P25800 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LMO1P25800 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.63■□□□□ 0.57
LMO1P25800 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
LMO1P25800 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LMO1P25800 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.63■□□□□ 0.57
LMO1P25800 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.63■□□□□ 0.57
LMO1P25800 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LMO1P25800 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.63■□□□□ 0.57
LMO1P25800 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LMO1P25800 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.63■□□□□ 0.57
LMO1P25800 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms