Protein–RNA interactions for Protein: P0DMP2

SRGAP2B, SLIT-ROBO Rho GTPase-activating protein 2B, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2BP0DMP2 AC004911.1-201ENST00000416316 871 ntBASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 AC092437.1-201ENST00000624794 1048 ntBASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRGAP2BP0DMP2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 ID1-201ENST00000376105 1233 ntBASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
SRGAP2BP0DMP2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
SRGAP2BP0DMP2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SRGAP2BP0DMP2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 AC093323.1-202ENST00000635031 2045 ntBASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SRGAP2BP0DMP2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
SRGAP2BP0DMP2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 MIR6084-201ENST00000622012 110 ntBASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.79■■□□□ 1.4
SRGAP2BP0DMP2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRGAP2BP0DMP2 LINC00543-201ENST00000567234 1845 ntBASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 CCDC92B-201ENST00000575506 885 ntBASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 NTF6G-201ENST00000591094 616 ntBASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 LINC02228-203ENST00000641970 1355 ntBASIC23.77■■□□□ 1.4
SRGAP2BP0DMP2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms