Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YNL120CYNL120C 486 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 YOL150CYOL150C 312 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 YOR366WYOR366W 354 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 YME1YPR024W 2244 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 KEX2YNL238W 2445 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 RAD18YCR066W 1464 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 NOP8YOL144W 1455 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 SPO23YBR250W 1572 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 MOT2YER068W 1764 nt5.49□□□□□ -1.53
TY1A-ER1P0CX71 RPT4YOR259C 1314 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 YEL020CYEL020C 1683 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 ERP3YDL018C 678 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 SLC1YDL052C 912 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 SNO3YFL060C 669 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 NAT2YGR147C 867 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 GTR2YGR163W 1026 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 CAP2YIL034C 864 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 RPI1YIL119C 1224 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 PAU15YIR041W 375 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 GCD14YJL125C 1152 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 UPS2YLR168C 693 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 YML047W-AYML047W-A 366 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 SNO2YNL334C 669 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 COS10YNR075W 1125 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 COQ3YOL096C 939 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 WRS1YOL097C 1299 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 FCY1YPR062W 477 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 PYC2YBR218C 3543 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 HSP104YLL026W 2727 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 ALD6YPL061W 1503 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 PEX3YDR329C 1326 nt5.48□□□□□ -1.53
TY1A-ER1P0CX71 PMS1YNL082W 2622 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 OCT1YKL134C 2319 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 SFB3YHR098C 2790 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 MRPS28YDR337W 861 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 NKP1YDR383C 717 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 RPL12AYEL054C 498 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 RPL7AYGL076C 735 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 YGL138CYGL138C 1038 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 KAE1YKR038C 1161 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 ECI1YLR284C 843 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 RPL7BYPL198W 735 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 MLC2YPR188C 492 nt5.47□□□□□ -1.53
TY1A-ER1P0CX71 RCM1YNL022C 1473 nt5.46□□□□□ -1.53
TY1A-ER1P0CX71 ITT1YML068W 1395 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 YCL076WYCL076W 744 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 MRPL35YDR322W 1104 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 YIR042CYIR042C 711 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 SFT1YKL006C-A 294 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 YNL046WYNL046W 519 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 YOL029CYOL029C 606 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 PEX15YOL044W 1152 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 TOA1YOR194C 861 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 YOR268CYOR268C 399 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 MEI5YPL121C 669 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 TDA6YPR157W 1404 nt5.46□□□□□ -1.54
TY1A-ER1P0CX71 SCT1YBL011W 2280 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 MCM6YGL201C 3054 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 ERG8YMR220W 1356 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 MIX14YDR031W 366 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 UPF3YGR072W 1164 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 MRP4YHL004W 1185 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 YIR023C-AYIR023C-A 324 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 SDH3YKL141W 597 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 YOR314WYOR314W 330 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 YOR343CYOR343C 327 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 PRY3YJL078C 2646 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 AVT2YEL064C 1443 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 PDH1YPR002W 1551 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 RBA50YDR527W 1320 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 GCN5YGR252W 1320 nt5.45□□□□□ -1.54
TY1A-ER1P0CX71 GZF3YJL110C 1656 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 HMO1YDR174W 741 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 tS(GCU)LtS(GCU)L 80 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 YJL114WYJL114W 681 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 MET14YKL001C 609 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 YLR257WYLR257W 966 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 RPS30AYLR287C-A 192 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 PRX1YBL064C 786 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 ZIM17YNL310C 525 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 YBR232CYBR232C 360 nt5.44□□□□□ -1.54
TY1A-ER1P0CX71 MKK2YPL140C 1521 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 PPH3YDR075W 927 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 TAF10YDR167W 621 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 WBP1YEL002C 1293 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 MXR1YER042W 555 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 MPC2YHR162W 390 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YAL016C-AYAL016C-A 315 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 GPX1YKL026C 504 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 NFU1YKL040C 771 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YLR184WYLR184W 348 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YLR406C-AYLR406C-A 150 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YMR130WYMR130W 909 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YBL059WYBL059W 582 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YBR056W-AYBR056W-A 201 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YPR123CYPR123C 435 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 YBR096WYBR096W 693 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 CCZ1YBR131W 2115 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 HIR1YBL008W 2523 nt5.43□□□□□ -1.54
TY1A-ER1P0CX71 SSK1YLR006C 2139 nt5.42□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms