Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC1P07992 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC1P07992 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC1P07992 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ERCC1P07992 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC1P07992 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC1P07992 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC1P07992 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC1P07992 AC131281.2-201ENST00000520478 145 ntBASIC19.6■□□□□ 0.73
ERCC1P07992 AC233723.2-201ENST00000623798 2106 ntBASIC19.6■□□□□ 0.73
ERCC1P07992 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC1P07992 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC1P07992 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC1P07992 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC1P07992 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC1P07992 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC1P07992 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.59■□□□□ 0.73
ERCC1P07992 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.59■□□□□ 0.73
ERCC1P07992 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC1P07992 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ERCC1P07992 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.58■□□□□ 0.73
ERCC1P07992 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC1P07992 AC005703.6-201ENST00000623265 1329 ntBASIC19.58■□□□□ 0.73
ERCC1P07992 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ERCC1P07992 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC1P07992 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.58■□□□□ 0.72
ERCC1P07992 ALDH1A3-203ENST00000557963 1670 ntBASIC19.58■□□□□ 0.72
ERCC1P07992 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.58■□□□□ 0.72
ERCC1P07992 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC1P07992 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC1P07992 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC1P07992 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC1P07992 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC1P07992 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC1P07992 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC1P07992 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC1P07992 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC1P07992 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC1P07992 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC1P07992 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC1P07992 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC1P07992 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ERCC1P07992 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ERCC1P07992 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 AC019069.1-201ENST00000610008 1333 ntBASIC19.56■□□□□ 0.72
ERCC1P07992 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ERCC1P07992 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ERCC1P07992 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC1P07992 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC1P07992 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC1P07992 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ERCC1P07992 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ERCC1P07992 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC1P07992 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ERCC1P07992 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC1P07992 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC1P07992 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC1P07992 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC1P07992 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ERCC1P07992 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.54■□□□□ 0.72
ERCC1P07992 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ERCC1P07992 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC1P07992 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.53■□□□□ 0.72
ERCC1P07992 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.53■□□□□ 0.72
ERCC1P07992 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ERCC1P07992 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ERCC1P07992 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ERCC1P07992 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms