Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HMGN1P05114 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HMGN1P05114 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGN1P05114 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HMGN1P05114 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGN1P05114 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGN1P05114 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGN1P05114 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGN1P05114 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGN1P05114 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGN1P05114 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGN1P05114 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGN1P05114 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGN1P05114 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGN1P05114 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGN1P05114 AC092053.2-201ENST00000640557 1818 ntBASIC20.09■□□□□ 0.81
HMGN1P05114 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGN1P05114 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.08■□□□□ 0.81
HMGN1P05114 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGN1P05114 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGN1P05114 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HMGN1P05114 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGN1P05114 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
HMGN1P05114 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HMGN1P05114 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.08■□□□□ 0.8
HMGN1P05114 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
HMGN1P05114 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
HMGN1P05114 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGN1P05114 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.07■□□□□ 0.8
HMGN1P05114 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.07■□□□□ 0.8
HMGN1P05114 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HMGN1P05114 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGN1P05114 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGN1P05114 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGN1P05114 NTF6A-201ENST00000591175 560 ntBASIC20.06■□□□□ 0.8
HMGN1P05114 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGN1P05114 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGN1P05114 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGN1P05114 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGN1P05114 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HMGN1P05114 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGN1P05114 ABHD17AP5-201ENST00000580133 923 ntBASIC20.05■□□□□ 0.8
HMGN1P05114 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGN1P05114 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGN1P05114 AC144652.1-201ENST00000609974 1624 ntBASIC20.05■□□□□ 0.8
HMGN1P05114 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGN1P05114 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
HMGN1P05114 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 AC139530.1-201ENST00000575312 1977 ntBASIC20.04■□□□□ 0.8
HMGN1P05114 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.04■□□□□ 0.8
HMGN1P05114 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
HMGN1P05114 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.04■□□□□ 0.8
HMGN1P05114 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGN1P05114 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMGN1P05114 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 C11orf96-202ENST00000528572 1834 ntBASIC20.04■□□□□ 0.8
HMGN1P05114 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGN1P05114 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGN1P05114 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
HMGN1P05114 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGN1P05114 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGN1P05114 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms