Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
TGFAP01135 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TGFAP01135 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TGFAP01135 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TGFAP01135 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.34■□□□□ 0.53
TGFAP01135 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.34■□□□□ 0.53
TGFAP01135 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TGFAP01135 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TGFAP01135 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.34■□□□□ 0.53
TGFAP01135 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.34■□□□□ 0.53
TGFAP01135 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TGFAP01135 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
TGFAP01135 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.34■□□□□ 0.53
TGFAP01135 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TGFAP01135 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TGFAP01135 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.33■□□□□ 0.53
TGFAP01135 LINC01529-204ENST00000636474 1715 ntBASIC18.33■□□□□ 0.52
TGFAP01135 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TGFAP01135 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TGFAP01135 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.33■□□□□ 0.52
TGFAP01135 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.33■□□□□ 0.52
TGFAP01135 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
TGFAP01135 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TGFAP01135 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TGFAP01135 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TGFAP01135 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.32■□□□□ 0.52
TGFAP01135 AP005435.1-201ENST00000529293 1178 ntBASIC18.32■□□□□ 0.52
TGFAP01135 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.32■□□□□ 0.52
TGFAP01135 AC105233.4-201ENST00000642045 216 ntBASIC18.32■□□□□ 0.52
TGFAP01135 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TGFAP01135 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TGFAP01135 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TGFAP01135 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TGFAP01135 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TGFAP01135 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TGFAP01135 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TGFAP01135 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 TERF1P2-201ENST00000583350 1212 ntBASIC18.31■□□□□ 0.52
TGFAP01135 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.31■□□□□ 0.52
TGFAP01135 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TGFAP01135 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TGFAP01135 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TGFAP01135 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.3■□□□□ 0.52
TGFAP01135 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TGFAP01135 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 AC144652.1-201ENST00000609974 1624 ntBASIC18.3■□□□□ 0.52
TGFAP01135 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.3■□□□□ 0.52
TGFAP01135 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.3■□□□□ 0.52
TGFAP01135 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TGFAP01135 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.29■□□□□ 0.52
TGFAP01135 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.29■□□□□ 0.52
TGFAP01135 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TGFAP01135 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.29■□□□□ 0.52
TGFAP01135 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.28■□□□□ 0.52
TGFAP01135 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.28■□□□□ 0.52
TGFAP01135 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.28■□□□□ 0.52
TGFAP01135 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms