Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SLC43A1O75387 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.09■□□□□ 0.81
SLC43A1O75387 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC43A1O75387 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC43A1O75387 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC43A1O75387 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC43A1O75387 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC43A1O75387 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC43A1O75387 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC43A1O75387 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC43A1O75387 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.08■□□□□ 0.8
SLC43A1O75387 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
SLC43A1O75387 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC43A1O75387 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SLC43A1O75387 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC43A1O75387 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC43A1O75387 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC43A1O75387 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.07■□□□□ 0.8
SLC43A1O75387 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC43A1O75387 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC43A1O75387 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC43A1O75387 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 AC127496.7-201ENST00000625110 1798 ntBASIC20.06■□□□□ 0.8
SLC43A1O75387 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC43A1O75387 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC43A1O75387 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC43A1O75387 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC43A1O75387 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC43A1O75387 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC43A1O75387 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC43A1O75387 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC43A1O75387 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC43A1O75387 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC43A1O75387 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC43A1O75387 AL356441.2-201ENST00000443009 864 ntBASIC20.05■□□□□ 0.8
SLC43A1O75387 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
SLC43A1O75387 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC43A1O75387 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 LINC00526-201ENST00000581067 1875 ntBASIC20.04■□□□□ 0.8
SLC43A1O75387 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC43A1O75387 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC43A1O75387 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC43A1O75387 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC43A1O75387 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC43A1O75387 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
SLC43A1O75387 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC43A1O75387 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC43A1O75387 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC43A1O75387 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC43A1O75387 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC43A1O75387 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC43A1O75387 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC43A1O75387 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC43A1O75387 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
SLC43A1O75387 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC43A1O75387 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SLC43A1O75387 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC43A1O75387 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC43A1O75387 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC43A1O75387 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC43A1O75387 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC43A1O75387 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC43A1O75387 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC43A1O75387 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SLC43A1O75387 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC43A1O75387 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20■□□□□ 0.79
SLC43A1O75387 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC43A1O75387 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC43A1O75387 AL356740.2-201ENST00000601559 647 ntBASIC20■□□□□ 0.79
SLC43A1O75387 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SLC43A1O75387 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20■□□□□ 0.79
SLC43A1O75387 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC43A1O75387 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20■□□□□ 0.79
SLC43A1O75387 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC43A1O75387 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms