Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 MFSD11-216ENST00000590393 1141 ntBASIC31.94■■■□□ 2.7
NPHP4O75161 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.94■■■□□ 2.7
NPHP4O75161 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NPHP4O75161 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NPHP4O75161 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NPHP4O75161 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NPHP4O75161 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NPHP4O75161 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.93■■■□□ 2.7
NPHP4O75161 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.93■■■□□ 2.7
NPHP4O75161 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NPHP4O75161 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NPHP4O75161 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NPHP4O75161 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NPHP4O75161 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
NPHP4O75161 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.92■■■□□ 2.7
NPHP4O75161 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NPHP4O75161 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NPHP4O75161 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
NPHP4O75161 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.91■■■□□ 2.7
NPHP4O75161 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
NPHP4O75161 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NPHP4O75161 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.91■■■□□ 2.7
NPHP4O75161 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.91■■■□□ 2.7
NPHP4O75161 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
NPHP4O75161 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
NPHP4O75161 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC31.9■■■□□ 2.7
NPHP4O75161 AL138781.1-201ENST00000566567 1274 ntBASIC31.9■■■□□ 2.7
NPHP4O75161 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.89■■■□□ 2.7
NPHP4O75161 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.89■■■□□ 2.7
NPHP4O75161 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
NPHP4O75161 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
NPHP4O75161 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
NPHP4O75161 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
NPHP4O75161 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 AC069152.1-201ENST00000438030 544 ntBASIC31.89■■■□□ 2.7
NPHP4O75161 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.89■■■□□ 2.7
NPHP4O75161 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
NPHP4O75161 AC008687.6-201ENST00000596318 630 ntBASIC31.89■■■□□ 2.7
NPHP4O75161 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.89■■■□□ 2.7
NPHP4O75161 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
NPHP4O75161 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.89■■■□□ 2.69
NPHP4O75161 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.88■■■□□ 2.69
NPHP4O75161 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NPHP4O75161 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC31.88■■■□□ 2.69
NPHP4O75161 AC083906.2-201ENST00000511578 360 ntBASIC31.88■■■□□ 2.69
NPHP4O75161 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.88■■■□□ 2.69
NPHP4O75161 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.88■■■□□ 2.69
NPHP4O75161 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC31.88■■■□□ 2.69
NPHP4O75161 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC31.88■■■□□ 2.69
NPHP4O75161 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
NPHP4O75161 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.88■■■□□ 2.69
NPHP4O75161 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.87■■■□□ 2.69
NPHP4O75161 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.87■■■□□ 2.69
NPHP4O75161 MAZ-216ENST00000616501 991 ntTSL 5 BASIC31.87■■■□□ 2.69
NPHP4O75161 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.86■■■□□ 2.69
NPHP4O75161 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
NPHP4O75161 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.86■■■□□ 2.69
NPHP4O75161 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.86■■■□□ 2.69
NPHP4O75161 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NPHP4O75161 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
NPHP4O75161 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NPHP4O75161 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.85■■■□□ 2.69
NPHP4O75161 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NPHP4O75161 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
NPHP4O75161 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.85■■■□□ 2.69
NPHP4O75161 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
NPHP4O75161 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.85■■■□□ 2.69
NPHP4O75161 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NPHP4O75161 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.84■■■□□ 2.69
NPHP4O75161 FAM201B-201ENST00000458407 597 ntBASIC31.84■■■□□ 2.69
NPHP4O75161 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 STX4-202ENST00000394998 1498 ntTSL 2 BASIC31.84■■■□□ 2.69
NPHP4O75161 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
NPHP4O75161 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC31.84■■■□□ 2.69
NPHP4O75161 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.83■■■□□ 2.69
NPHP4O75161 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
NPHP4O75161 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.83■■■□□ 2.69
NPHP4O75161 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 BX005040.4-201ENST00000637145 1518 ntBASIC31.83■■■□□ 2.69
NPHP4O75161 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.83■■■□□ 2.69
NPHP4O75161 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NPHP4O75161 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
NPHP4O75161 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NPHP4O75161 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
NPHP4O75161 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
NPHP4O75161 TESC-206ENST00000541210 936 ntTSL 3 BASIC31.82■■■□□ 2.68
NPHP4O75161 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC31.82■■■□□ 2.68
NPHP4O75161 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms