Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC127496.7-201ENST00000625110 1798 ntBASIC23.8■■□□□ 1.4
RNF40O75150 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.8■■□□□ 1.4
RNF40O75150 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF40O75150 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RNF40O75150 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RNF40O75150 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 MIR6089-201ENST00000616698 64 ntBASIC23.79■■□□□ 1.4
RNF40O75150 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.79■■□□□ 1.4
RNF40O75150 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.79■■□□□ 1.4
RNF40O75150 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RNF40O75150 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF40O75150 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RNF40O75150 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.78■■□□□ 1.4
RNF40O75150 PBX2P1-201ENST00000493219 1291 ntBASIC23.78■■□□□ 1.4
RNF40O75150 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.78■■□□□ 1.4
RNF40O75150 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.78■■□□□ 1.4
RNF40O75150 MIR6722-201ENST00000617286 78 ntBASIC23.78■■□□□ 1.4
RNF40O75150 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF40O75150 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RNF40O75150 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
RNF40O75150 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RNF40O75150 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RNF40O75150 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.77■■□□□ 1.4
RNF40O75150 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF40O75150 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF40O75150 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF40O75150 AC106739.1-201ENST00000617035 715 ntBASIC23.77■■□□□ 1.4
RNF40O75150 GUSBP5-202ENST00000510805 1989 ntBASIC23.77■■□□□ 1.4
RNF40O75150 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RNF40O75150 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF40O75150 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF40O75150 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RNF40O75150 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.77■■□□□ 1.4
RNF40O75150 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF40O75150 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RNF40O75150 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.76■■□□□ 1.39
RNF40O75150 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.76■■□□□ 1.39
RNF40O75150 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF40O75150 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.76■■□□□ 1.39
RNF40O75150 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RNF40O75150 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.75■■□□□ 1.39
RNF40O75150 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF40O75150 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RNF40O75150 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RNF40O75150 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF40O75150 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF40O75150 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF40O75150 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
RNF40O75150 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF40O75150 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF40O75150 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF40O75150 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF40O75150 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.74■■□□□ 1.39
RNF40O75150 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF40O75150 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.74■■□□□ 1.39
RNF40O75150 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RNF40O75150 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF40O75150 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RNF40O75150 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.73■■□□□ 1.39
RNF40O75150 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF40O75150 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RNF40O75150 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF40O75150 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF40O75150 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF40O75150 UNC93B3-201ENST00000308076 687 ntBASIC23.72■■□□□ 1.39
RNF40O75150 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RNF40O75150 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF40O75150 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF40O75150 AC142381.2-201ENST00000566120 298 ntBASIC23.72■■□□□ 1.39
RNF40O75150 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms