Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TBC1D4O60343 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TBC1D4O60343 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TBC1D4O60343 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.64■■□□□ 1.37
TBC1D4O60343 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TBC1D4O60343 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.63■■□□□ 1.37
TBC1D4O60343 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.63■■□□□ 1.37
TBC1D4O60343 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.63■■□□□ 1.37
TBC1D4O60343 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.63■■□□□ 1.37
TBC1D4O60343 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.63■■□□□ 1.37
TBC1D4O60343 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TBC1D4O60343 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TBC1D4O60343 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TBC1D4O60343 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TBC1D4O60343 MIR572-201ENST00000384983 95 ntBASIC23.62■■□□□ 1.37
TBC1D4O60343 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
TBC1D4O60343 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TBC1D4O60343 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.62■■□□□ 1.37
TBC1D4O60343 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TBC1D4O60343 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TBC1D4O60343 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.61■■□□□ 1.37
TBC1D4O60343 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.61■■□□□ 1.37
TBC1D4O60343 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.61■■□□□ 1.37
TBC1D4O60343 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TBC1D4O60343 AL162430.1-201ENST00000480705 870 ntBASIC23.61■■□□□ 1.37
TBC1D4O60343 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
TBC1D4O60343 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TBC1D4O60343 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TBC1D4O60343 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TBC1D4O60343 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.6■■□□□ 1.37
TBC1D4O60343 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TBC1D4O60343 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TBC1D4O60343 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.6■■□□□ 1.37
TBC1D4O60343 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.6■■□□□ 1.37
TBC1D4O60343 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.6■■□□□ 1.37
TBC1D4O60343 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.6■■□□□ 1.37
TBC1D4O60343 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.59■■□□□ 1.37
TBC1D4O60343 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D4O60343 AC079630.1-202ENST00000618127 1840 ntBASIC23.59■■□□□ 1.37
TBC1D4O60343 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D4O60343 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D4O60343 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D4O60343 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TBC1D4O60343 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.59■■□□□ 1.37
TBC1D4O60343 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
TBC1D4O60343 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TBC1D4O60343 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TBC1D4O60343 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.59■■□□□ 1.37
TBC1D4O60343 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TBC1D4O60343 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.58■■□□□ 1.37
TBC1D4O60343 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.58■■□□□ 1.37
TBC1D4O60343 AP005435.1-201ENST00000529293 1178 ntBASIC23.58■■□□□ 1.37
TBC1D4O60343 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TBC1D4O60343 AL358852.1-201ENST00000623174 1268 ntBASIC23.58■■□□□ 1.37
TBC1D4O60343 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TBC1D4O60343 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D4O60343 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
TBC1D4O60343 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D4O60343 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.57■■□□□ 1.36
TBC1D4O60343 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TBC1D4O60343 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.57■■□□□ 1.36
TBC1D4O60343 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
TBC1D4O60343 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.57■■□□□ 1.36
TBC1D4O60343 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TBC1D4O60343 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TBC1D4O60343 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TBC1D4O60343 AC027612.3-201ENST00000413684 1047 ntBASIC23.56■■□□□ 1.36
TBC1D4O60343 YBX1P1-201ENST00000445822 960 ntBASIC23.56■■□□□ 1.36
TBC1D4O60343 AL031602.1-201ENST00000633169 911 ntBASIC23.56■■□□□ 1.36
TBC1D4O60343 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.56■■□□□ 1.36
TBC1D4O60343 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TBC1D4O60343 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TBC1D4O60343 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TBC1D4O60343 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TBC1D4O60343 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms