Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC073130.3-201ENST00000624389 2278 ntBASIC17.24■□□□□ 0.35
PDE6DO43924 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6DO43924 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6DO43924 AC090877.2-201ENST00000558441 1738 ntBASIC17.24■□□□□ 0.35
PDE6DO43924 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6DO43924 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
PDE6DO43924 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6DO43924 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.23■□□□□ 0.35
PDE6DO43924 AC079630.1-202ENST00000618127 1840 ntBASIC17.23■□□□□ 0.35
PDE6DO43924 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6DO43924 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6DO43924 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.22■□□□□ 0.35
PDE6DO43924 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.22■□□□□ 0.35
PDE6DO43924 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PDE6DO43924 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PDE6DO43924 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
PDE6DO43924 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PDE6DO43924 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDE6DO43924 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.21■□□□□ 0.34
PDE6DO43924 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PDE6DO43924 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 AC080038.3-201ENST00000623346 1952 ntBASIC17.2■□□□□ 0.34
PDE6DO43924 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6DO43924 ALDH1A3-203ENST00000557963 1670 ntBASIC17.2■□□□□ 0.34
PDE6DO43924 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6DO43924 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6DO43924 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.2■□□□□ 0.34
PDE6DO43924 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.2■□□□□ 0.34
PDE6DO43924 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PDE6DO43924 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6DO43924 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDE6DO43924 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.2■□□□□ 0.34
PDE6DO43924 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDE6DO43924 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDE6DO43924 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.19■□□□□ 0.34
PDE6DO43924 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.19■□□□□ 0.34
PDE6DO43924 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDE6DO43924 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.19■□□□□ 0.34
PDE6DO43924 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDE6DO43924 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6DO43924 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.18■□□□□ 0.34
PDE6DO43924 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.18■□□□□ 0.34
PDE6DO43924 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PDE6DO43924 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDE6DO43924 FAM99A-202ENST00000538190 1989 ntBASIC17.18■□□□□ 0.34
PDE6DO43924 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDE6DO43924 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.17■□□□□ 0.34
PDE6DO43924 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.17■□□□□ 0.34
PDE6DO43924 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PDE6DO43924 RP9P-202ENST00000450133 1212 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms