Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.66■■□□□ 1.38
SYN3O14994 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.66■■□□□ 1.38
SYN3O14994 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 ABCB10P4-201ENST00000566803 2184 ntBASIC23.66■■□□□ 1.38
SYN3O14994 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.66■■□□□ 1.38
SYN3O14994 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.66■■□□□ 1.38
SYN3O14994 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.66■■□□□ 1.38
SYN3O14994 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYN3O14994 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.65■■□□□ 1.38
SYN3O14994 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.65■■□□□ 1.38
SYN3O14994 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.65■■□□□ 1.38
SYN3O14994 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.65■■□□□ 1.38
SYN3O14994 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.65■■□□□ 1.38
SYN3O14994 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.65■■□□□ 1.38
SYN3O14994 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SYN3O14994 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYN3O14994 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SYN3O14994 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.64■■□□□ 1.37
SYN3O14994 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYN3O14994 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SYN3O14994 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SYN3O14994 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYN3O14994 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.63■■□□□ 1.37
SYN3O14994 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.63■■□□□ 1.37
SYN3O14994 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SYN3O14994 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.63■■□□□ 1.37
SYN3O14994 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYN3O14994 AC104564.3-201ENST00000582367 638 ntBASIC23.63■■□□□ 1.37
SYN3O14994 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SYN3O14994 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SYN3O14994 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 YBX1P1-201ENST00000445822 960 ntBASIC23.62■■□□□ 1.37
SYN3O14994 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.62■■□□□ 1.37
SYN3O14994 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.62■■□□□ 1.37
SYN3O14994 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYN3O14994 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SYN3O14994 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SYN3O14994 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.61■■□□□ 1.37
SYN3O14994 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SYN3O14994 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYN3O14994 AC027612.3-201ENST00000413684 1047 ntBASIC23.61■■□□□ 1.37
SYN3O14994 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SYN3O14994 AC012414.1-201ENST00000556676 535 ntBASIC23.61■■□□□ 1.37
SYN3O14994 AL354811.1-201ENST00000610286 706 ntBASIC23.61■■□□□ 1.37
SYN3O14994 AC092666.2-201ENST00000613287 246 ntBASIC23.61■■□□□ 1.37
SYN3O14994 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.61■■□□□ 1.37
SYN3O14994 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SYN3O14994 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SYN3O14994 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.6■■□□□ 1.37
SYN3O14994 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.6■■□□□ 1.37
SYN3O14994 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.6■■□□□ 1.37
SYN3O14994 AL353803.4-201ENST00000565882 1934 ntBASIC23.6■■□□□ 1.37
SYN3O14994 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.6■■□□□ 1.37
SYN3O14994 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYN3O14994 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.59■■□□□ 1.37
SYN3O14994 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
SYN3O14994 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.59■■□□□ 1.37
SYN3O14994 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYN3O14994 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.59■■□□□ 1.37
SYN3O14994 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.59■■□□□ 1.37
SYN3O14994 AL162430.1-201ENST00000480705 870 ntBASIC23.59■■□□□ 1.37
SYN3O14994 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYN3O14994 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYN3O14994 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYN3O14994 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYN3O14994 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SYN3O14994 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SYN3O14994 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.58■■□□□ 1.37
SYN3O14994 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.58■■□□□ 1.37
SYN3O14994 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SYN3O14994 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.58■■□□□ 1.37
SYN3O14994 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SYN3O14994 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SYN3O14994 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.58■■□□□ 1.37
SYN3O14994 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SYN3O14994 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SYN3O14994 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYN3O14994 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.57■■□□□ 1.36
SYN3O14994 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms