Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.82■■□□□ 1.08
CDC7O00311 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDC7O00311 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.82■■□□□ 1.08
CDC7O00311 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CDC7O00311 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDC7O00311 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDC7O00311 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDC7O00311 FP325331.1-202ENST00000623531 1380 ntBASIC21.81■■□□□ 1.08
CDC7O00311 EP400NL-214ENST00000641289 2402 ntBASIC21.81■■□□□ 1.08
CDC7O00311 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDC7O00311 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDC7O00311 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC7O00311 GUSBP5-202ENST00000510805 1989 ntBASIC21.8■■□□□ 1.08
CDC7O00311 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.8■■□□□ 1.08
CDC7O00311 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC7O00311 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDC7O00311 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDC7O00311 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDC7O00311 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.8■■□□□ 1.08
CDC7O00311 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDC7O00311 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.79■■□□□ 1.08
CDC7O00311 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC7O00311 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC7O00311 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDC7O00311 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC7O00311 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.79■■□□□ 1.08
CDC7O00311 MIR6724-1-201ENST00000616420 92 ntBASIC21.79■■□□□ 1.08
CDC7O00311 MIR6724-2-201ENST00000616483 92 ntBASIC21.79■■□□□ 1.08
CDC7O00311 MIR6724-4-201ENST00000617390 92 ntBASIC21.79■■□□□ 1.08
CDC7O00311 MIR6724-3-201ENST00000622482 92 ntBASIC21.79■■□□□ 1.08
CDC7O00311 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CDC7O00311 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDC7O00311 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CDC7O00311 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDC7O00311 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDC7O00311 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDC7O00311 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.78■■□□□ 1.08
CDC7O00311 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDC7O00311 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDC7O00311 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
CDC7O00311 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC7O00311 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.78■■□□□ 1.08
CDC7O00311 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDC7O00311 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDC7O00311 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC7O00311 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.77■■□□□ 1.08
CDC7O00311 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.77■■□□□ 1.08
CDC7O00311 KRT16P3-201ENST00000439127 1283 ntBASIC21.77■■□□□ 1.08
CDC7O00311 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.77■■□□□ 1.08
CDC7O00311 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.77■■□□□ 1.08
CDC7O00311 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.77■■□□□ 1.08
CDC7O00311 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDC7O00311 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDC7O00311 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC7O00311 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.76■■□□□ 1.07
CDC7O00311 C17orf82-201ENST00000623772 1530 ntBASIC21.76■■□□□ 1.07
CDC7O00311 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDC7O00311 DUX4L4-201ENST00000566884 1269 ntBASIC21.76■■□□□ 1.07
CDC7O00311 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDC7O00311 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.76■■□□□ 1.07
CDC7O00311 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
CDC7O00311 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 GUSBP5-201ENST00000418136 578 ntBASIC21.75■■□□□ 1.07
CDC7O00311 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.75■■□□□ 1.07
CDC7O00311 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CDC7O00311 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDC7O00311 ESRRAP2-201ENST00000418437 1549 ntBASIC21.75■■□□□ 1.07
CDC7O00311 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDC7O00311 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CDC7O00311 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDC7O00311 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms