Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
CLIC1O00299 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC1O00299 AC103724.3-201ENST00000564481 992 ntBASIC20.96■□□□□ 0.95
CLIC1O00299 AL033527.3-201ENST00000566366 1196 ntBASIC20.96■□□□□ 0.95
CLIC1O00299 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC1O00299 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC1O00299 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CLIC1O00299 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC1O00299 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CLIC1O00299 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLIC1O00299 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC1O00299 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC1O00299 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC1O00299 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC1O00299 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CLIC1O00299 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.95■□□□□ 0.94
CLIC1O00299 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLIC1O00299 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC1O00299 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC1O00299 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC1O00299 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC1O00299 YBX1P4-201ENST00000392794 808 ntBASIC20.94■□□□□ 0.94
CLIC1O00299 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC1O00299 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC1O00299 KRT8P33-201ENST00000508125 1423 ntBASIC20.94■□□□□ 0.94
CLIC1O00299 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC1O00299 AC137767.1-201ENST00000602918 1920 ntBASIC20.94■□□□□ 0.94
CLIC1O00299 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
CLIC1O00299 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.93■□□□□ 0.94
CLIC1O00299 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CLIC1O00299 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.93■□□□□ 0.94
CLIC1O00299 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC1O00299 AC137630.3-201ENST00000607245 391 ntBASIC20.93■□□□□ 0.94
CLIC1O00299 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC1O00299 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.93■□□□□ 0.94
CLIC1O00299 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC1O00299 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC1O00299 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIC1O00299 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLIC1O00299 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.92■□□□□ 0.94
CLIC1O00299 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.92■□□□□ 0.94
CLIC1O00299 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIC1O00299 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIC1O00299 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.92■□□□□ 0.94
CLIC1O00299 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC1O00299 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIC1O00299 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIC1O00299 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.91■□□□□ 0.94
CLIC1O00299 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.91■□□□□ 0.94
CLIC1O00299 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.91■□□□□ 0.94
CLIC1O00299 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC1O00299 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC1O00299 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC1O00299 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC1O00299 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC1O00299 AC139530.1-201ENST00000575312 1977 ntBASIC20.9■□□□□ 0.94
CLIC1O00299 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLIC1O00299 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CLIC1O00299 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLIC1O00299 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
CLIC1O00299 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIC1O00299 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLIC1O00299 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIC1O00299 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CLIC1O00299 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.89■□□□□ 0.93
CLIC1O00299 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.89■□□□□ 0.93
CLIC1O00299 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLIC1O00299 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms