Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L3A6NE82 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MBD3L3A6NE82 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 AC092666.2-201ENST00000613287 246 ntBASIC19.7■□□□□ 0.74
MBD3L3A6NE82 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MBD3L3A6NE82 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 YBX1P1-201ENST00000445822 960 ntBASIC19.69■□□□□ 0.74
MBD3L3A6NE82 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MBD3L3A6NE82 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 AC027612.3-201ENST00000413684 1047 ntBASIC19.68■□□□□ 0.74
MBD3L3A6NE82 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 AL162430.1-201ENST00000480705 870 ntBASIC19.68■□□□□ 0.74
MBD3L3A6NE82 AC012414.1-201ENST00000556676 535 ntBASIC19.68■□□□□ 0.74
MBD3L3A6NE82 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 AL354811.1-201ENST00000610286 706 ntBASIC19.68■□□□□ 0.74
MBD3L3A6NE82 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MBD3L3A6NE82 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 ABCB10P4-201ENST00000566803 2184 ntBASIC19.67■□□□□ 0.74
MBD3L3A6NE82 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD3L3A6NE82 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD3L3A6NE82 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD3L3A6NE82 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD3L3A6NE82 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 AC123595.1-201ENST00000440769 1046 ntBASIC19.64■□□□□ 0.73
MBD3L3A6NE82 AC034268.1-201ENST00000441047 882 ntBASIC19.64■□□□□ 0.73
MBD3L3A6NE82 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD3L3A6NE82 AL353803.4-201ENST00000565882 1934 ntBASIC19.63■□□□□ 0.73
MBD3L3A6NE82 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.63■□□□□ 0.73
MBD3L3A6NE82 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms