Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC144AA2RUR9 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.28■■■□□ 2.76
CCDC144AA2RUR9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
CCDC144AA2RUR9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
CCDC144AA2RUR9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.27■■■□□ 2.76
CCDC144AA2RUR9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
CCDC144AA2RUR9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC32.27■■■□□ 2.76
CCDC144AA2RUR9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
CCDC144AA2RUR9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
CCDC144AA2RUR9 AL358852.1-201ENST00000623174 1268 ntBASIC32.26■■■□□ 2.76
CCDC144AA2RUR9 H19-210ENST00000439725 1929 ntTSL 2 BASIC32.26■■■□□ 2.76
CCDC144AA2RUR9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.26■■■□□ 2.75
CCDC144AA2RUR9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC144AA2RUR9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 AP005435.1-201ENST00000529293 1178 ntBASIC32.24■■■□□ 2.75
CCDC144AA2RUR9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CCDC144AA2RUR9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CCDC144AA2RUR9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.22■■■□□ 2.75
CCDC144AA2RUR9 MIR6084-201ENST00000622012 110 ntBASIC32.22■■■□□ 2.75
CCDC144AA2RUR9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC32.22■■■□□ 2.75
CCDC144AA2RUR9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 AL354811.1-201ENST00000610286 706 ntBASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC144AA2RUR9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CCDC144AA2RUR9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CCDC144AA2RUR9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.2■■■□□ 2.75
CCDC144AA2RUR9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC32.2■■■□□ 2.74
CCDC144AA2RUR9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC32.2■■■□□ 2.74
CCDC144AA2RUR9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
CCDC144AA2RUR9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC32.18■■■□□ 2.74
CCDC144AA2RUR9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC144AA2RUR9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC32.18■■■□□ 2.74
CCDC144AA2RUR9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CCDC144AA2RUR9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 AL353803.4-201ENST00000565882 1934 ntBASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC32.17■■■□□ 2.74
CCDC144AA2RUR9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 AC004687.1-201ENST00000579003 1625 ntBASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 AC034268.1-201ENST00000441047 882 ntBASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CCDC144AA2RUR9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 DUX4L2-201ENST00000561772 1275 ntBASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.15■■■□□ 2.74
CCDC144AA2RUR9 DUX4L6-201ENST00000626483 1275 ntBASIC32.15■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms