Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 AL499627.2-201ENST00000606283 725 ntBASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC196A0A1B0GTZ2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 DUX4L19-201ENST00000557448 1267 ntBASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC196A0A1B0GTZ2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 AL136116.3-201ENST00000402907 1138 ntBASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC196A0A1B0GTZ2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC196A0A1B0GTZ2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 AC006455.2-201ENST00000429931 906 ntBASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.73
CCDC196A0A1B0GTZ2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 AC008406.3-201ENST00000620001 1374 ntBASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC196A0A1B0GTZ2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 C9orf163-202ENST00000624034 2573 ntBASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 pRNA.6-201ENST00000610482 90 ntBASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 pRNA.5-201ENST00000612139 90 ntBASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 pRNA.11-201ENST00000618423 90 ntBASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 pRNA.13-201ENST00000619112 90 ntBASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
CCDC196A0A1B0GTZ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC196A0A1B0GTZ2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 SYT6-210ENST00000641643 1587 ntBASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 MIR3181-201ENST00000578512 73 ntBASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 AC068473.5-201ENST00000616428 2072 ntBASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
CCDC196A0A1B0GTZ2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC196A0A1B0GTZ2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC196A0A1B0GTZ2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms