Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 LINC02228-203ENST00000641970 1355 ntBASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 AL137784.2-201ENST00000607332 1000 ntBASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV17A0A0B4J275 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 CCDC92B-201ENST00000575506 885 ntBASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV17A0A0B4J275 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAV17A0A0B4J275 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 AC105233.4-201ENST00000642045 216 ntBASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV17A0A0B4J275 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 KRT18P14-201ENST00000534205 1250 ntBASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV17A0A0B4J275 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 TERF1P2-201ENST00000583350 1212 ntBASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 IKBKGP1-201ENST00000612193 1073 ntBASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV17A0A0B4J275 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 RARRES2P11-201ENST00000635158 484 ntBASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV17A0A0B4J275 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms