Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV5A0A0B4J249 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 KRT18P60-201ENST00000312876 1297 ntBASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV5A0A0B4J249 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 AC080038.3-201ENST00000623346 1952 ntBASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 AC092053.2-201ENST00000640557 1818 ntBASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV5A0A0B4J249 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 C11orf96-202ENST00000528572 1834 ntBASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 RARRES2P2-201ENST00000394842 485 ntBASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 DUX4L18-201ENST00000553347 1267 ntBASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 AC120024.1-201ENST00000562672 995 ntBASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV5A0A0B4J249 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 AF131216.4-201ENST00000638924 1588 ntBASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 AC139795.1-202ENST00000500444 432 ntBASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 AC022616.5-201ENST00000518796 181 ntBASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV5A0A0B4J249 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV5A0A0B4J249 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 AC019171.1-201ENST00000601251 1056 ntBASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV5A0A0B4J249 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 FBXW4P1-201ENST00000426721 2239 ntBASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV5A0A0B4J249 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms