Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC112250.1-201ENST00000504640 745 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AP003040.1-201ENST00000532044 1024 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AC006986.1-201ENST00000612764 241 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AC026120.2-201ENST00000617239 309 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AC020922.4-201ENST00000621389 339 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 NCLP1-201ENST00000445357 1963 ntBASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CTC1Q2NKJ3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 U73169.1-201ENST00000395152 367 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 SNRPCP15-201ENST00000424055 192 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AC099328.1-201ENST00000498809 1030 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 RN7SL440P-201ENST00000577855 343 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ACTBP9-201ENST00000587663 1099 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 KF455155.1-201ENST00000604493 303 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 BX322562.1-201ENST00000617004 561 ntBASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CTC1Q2NKJ3 AL121753.2-201ENST00000624581 1461 ntBASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 AL590824.1-201ENST00000403828 1349 ntBASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC14.5□□□□□ -0.09
CTC1Q2NKJ3 AL356000.1-201ENST00000441073 1238 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms