Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 AFG3L2P1-201ENST00000521792 1763 ntBASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 RN7SL341P-201ENST00000613745 298 ntBASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 AC015959.1-201ENST00000623263 1377 ntBASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPHKAPQ2M3C7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AC091691.1-201ENST00000583587 1018 ntBASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AC091736.1-201ENST00000609370 305 ntBASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AC091941.1-201ENST00000623003 576 ntBASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 PKMP1-201ENST00000455804 1523 ntBASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHKAPQ2M3C7 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 OR7E122P-201ENST00000383606 1017 ntBASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AL365194.1-201ENST00000440032 361 ntTSL 3 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AL137077.1-201ENST00000442115 528 ntBASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 HNRNPA1P73-201ENST00000446472 928 ntBASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AC106748.1-201ENST00000454801 384 ntBASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 AC087893.1-201ENST00000612818 664 ntBASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
SPHKAPQ2M3C7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 CCNL2P1-201ENST00000512846 969 ntBASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 AACSP1-202ENST00000521412 1095 ntBASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 PPY-202ENST00000587006 431 ntTSL 3 BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC18.77■□□□□ 0.59
SPHKAPQ2M3C7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 IMPDH1P5-201ENST00000439688 1540 ntBASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHKAPQ2M3C7 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms