Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.03□□□□□ -0.48
CCR9P51686 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.03□□□□□ -0.48
CCR9P51686 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CCR9P51686 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
CCR9P51686 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.02□□□□□ -0.48
CCR9P51686 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CCR9P51686 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 AC007336.3-201ENST00000623886 2160 ntBASIC12.02□□□□□ -0.48
CCR9P51686 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.02□□□□□ -0.48
CCR9P51686 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CCR9P51686 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.02□□□□□ -0.49
CCR9P51686 AC104590.1-202ENST00000558368 1921 ntBASIC12.02□□□□□ -0.49
CCR9P51686 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CCR9P51686 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CCR9P51686 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.02□□□□□ -0.49
CCR9P51686 GOLGA2P4-201ENST00000441462 777 ntBASIC12.02□□□□□ -0.49
CCR9P51686 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 RCC2P8-201ENST00000502779 1035 ntBASIC12.02□□□□□ -0.49
CCR9P51686 AC005740.2-201ENST00000511085 419 ntBASIC12.02□□□□□ -0.49
CCR9P51686 FAM86HP-204ENST00000513466 959 ntBASIC12.02□□□□□ -0.49
CCR9P51686 ALG1L13P-202ENST00000519320 584 ntBASIC12.02□□□□□ -0.49
CCR9P51686 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.02□□□□□ -0.49
CCR9P51686 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 RN7SL560P-201ENST00000577943 264 ntBASIC12.02□□□□□ -0.49
CCR9P51686 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.02□□□□□ -0.49
CCR9P51686 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.02□□□□□ -0.49
CCR9P51686 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
CCR9P51686 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 AC008764.8-201ENST00000623966 2717 ntBASIC12.02□□□□□ -0.49
CCR9P51686 AC138028.6-201ENST00000616106 1482 ntBASIC12.02□□□□□ -0.49
CCR9P51686 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CCR9P51686 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CCR9P51686 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
CCR9P51686 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CCR9P51686 AL513497.1-201ENST00000624273 2083 ntBASIC12.01□□□□□ -0.49
CCR9P51686 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CCR9P51686 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.01□□□□□ -0.49
CCR9P51686 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.01□□□□□ -0.49
CCR9P51686 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CCR9P51686 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.01□□□□□ -0.49
CCR9P51686 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CCR9P51686 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 SERPINA13P-202ENST00000478994 924 ntBASIC12.01□□□□□ -0.49
CCR9P51686 FAM8A2P-201ENST00000528813 1142 ntBASIC12.01□□□□□ -0.49
CCR9P51686 MIR3197-201ENST00000582241 73 ntBASIC12.01□□□□□ -0.49
CCR9P51686 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.01□□□□□ -0.49
CCR9P51686 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.01□□□□□ -0.49
CCR9P51686 AL133467.4-201ENST00000602953 725 ntBASIC12.01□□□□□ -0.49
CCR9P51686 AC133552.6-201ENST00000613406 534 ntBASIC12.01□□□□□ -0.49
CCR9P51686 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CCR9P51686 AC009542.2-202ENST00000619004 1067 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms