Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GPC3P51654 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.97□□□□□ -0.01
GPC3P51654 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
GPC3P51654 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GPC3P51654 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GPC3P51654 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
GPC3P51654 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
GPC3P51654 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 MEX3B-202ENST00000558133 4333 ntBASIC14.96□□□□□ -0.01
GPC3P51654 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 PTGER4P2-201ENST00000328411 252 ntBASIC14.96□□□□□ -0.01
GPC3P51654 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 OR10N1P-201ENST00000392758 869 ntBASIC14.96□□□□□ -0.01
GPC3P51654 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.96□□□□□ -0.01
GPC3P51654 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 PTGER4P3-201ENST00000458150 252 ntBASIC14.96□□□□□ -0.01
GPC3P51654 VDAC1P11-201ENST00000458323 852 ntBASIC14.96□□□□□ -0.01
GPC3P51654 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 AC078814.4-201ENST00000546650 327 ntBASIC14.96□□□□□ -0.01
GPC3P51654 AC023968.2-201ENST00000560593 1049 ntBASIC14.96□□□□□ -0.01
GPC3P51654 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.96□□□□□ -0.01
GPC3P51654 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.96□□□□□ -0.01
GPC3P51654 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.96□□□□□ -0.01
GPC3P51654 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.96□□□□□ -0.01
GPC3P51654 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GPC3P51654 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC3P51654 TCAF1P1-201ENST00000414990 2232 ntBASIC14.96□□□□□ -0.02
GPC3P51654 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC3P51654 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC3P51654 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC3P51654 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
GPC3P51654 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.96□□□□□ -0.02
GPC3P51654 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 PGK1P2-201ENST00000431702 1214 ntBASIC14.95□□□□□ -0.02
GPC3P51654 HLA-DPA2-205ENST00000433582 733 ntBASIC14.95□□□□□ -0.02
GPC3P51654 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC3P51654 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC14.95□□□□□ -0.02
GPC3P51654 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GPC3P51654 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC3P51654 DNM1P51-201ENST00000558149 522 ntBASIC14.95□□□□□ -0.02
GPC3P51654 RN7SL134P-201ENST00000579756 303 ntBASIC14.95□□□□□ -0.02
GPC3P51654 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC3P51654 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.95□□□□□ -0.02
GPC3P51654 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.95□□□□□ -0.02
GPC3P51654 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms