Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 FAM223A-202ENST00000625204 713 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 PHBP11-201ENST00000420550 809 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 ATP5G1P7-201ENST00000444398 400 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC110753.1-201ENST00000505711 1022 ntBASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.68■□□□□ 0.74
CDC42BPAQ5VT25 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 AC067852.6-201ENST00000591237 1736 ntBASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 USP14-208ENST00000582707 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 HNRNPA1P30-202ENST00000440699 997 ntBASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 IGLVI-63-201ENST00000524184 384 ntBASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 RBP5-202ENST00000542370 564 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 AL118557.1-201ENST00000554408 440 ntBASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 SARS2-211ENST00000598831 665 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.67■□□□□ 0.74
CDC42BPAQ5VT25 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ART2P-201ENST00000415521 822 ntBASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 AC092327.1-201ENST00000596612 744 ntBASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 MIR7704-201ENST00000610524 59 ntBASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 AC073862.5-201ENST00000624129 2027 ntBASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 STX3-207ENST00000633708 3111 ntTSL 5 BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDC42BPAQ5VT25 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42BPAQ5VT25 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42BPAQ5VT25 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms