Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC11.73□□□□□ -0.53
CD40P25942 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 RN7SL134P-201ENST00000579756 303 ntBASIC11.73□□□□□ -0.53
CD40P25942 THY1-209ENST00000580275 578 ntTSL 3 BASIC11.73□□□□□ -0.53
CD40P25942 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 AC113385.2-201ENST00000614465 762 ntBASIC11.73□□□□□ -0.53
CD40P25942 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
CD40P25942 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.73□□□□□ -0.53
CD40P25942 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD40P25942 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD40P25942 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 PCDHA5-203ENST00000614258 4248 ntBASIC11.72□□□□□ -0.53
CD40P25942 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC11.72□□□□□ -0.53
CD40P25942 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.72□□□□□ -0.53
CD40P25942 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.72□□□□□ -0.53
CD40P25942 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 AC009474.1-201ENST00000455096 1565 ntBASIC11.72□□□□□ -0.53
CD40P25942 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 SNORD23-201ENST00000408876 110 ntBASIC11.72□□□□□ -0.53
CD40P25942 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.72□□□□□ -0.53
CD40P25942 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC11.72□□□□□ -0.53
CD40P25942 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
CD40P25942 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 RN7SL288P-201ENST00000490496 291 ntBASIC11.72□□□□□ -0.53
CD40P25942 ALG1L7P-201ENST00000502317 768 ntBASIC11.72□□□□□ -0.53
CD40P25942 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC11.72□□□□□ -0.53
CD40P25942 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC11.72□□□□□ -0.53
CD40P25942 AC068831.5-201ENST00000557387 328 ntBASIC11.72□□□□□ -0.53
CD40P25942 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC11.72□□□□□ -0.53
CD40P25942 AL022344.2-201ENST00000568976 968 ntBASIC11.72□□□□□ -0.53
CD40P25942 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC11.72□□□□□ -0.53
CD40P25942 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC11.72□□□□□ -0.53
CD40P25942 PEBP1P2-201ENST00000603980 558 ntBASIC11.72□□□□□ -0.53
CD40P25942 URAHP-205ENST00000610227 398 ntBASIC11.72□□□□□ -0.53
CD40P25942 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC11.72□□□□□ -0.53
CD40P25942 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC11.72□□□□□ -0.53
CD40P25942 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC11.72□□□□□ -0.53
CD40P25942 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD40P25942 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CD40P25942 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CD40P25942 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CD40P25942 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
CD40P25942 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
CD40P25942 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CD40P25942 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
CD40P25942 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
CD40P25942 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CD40P25942 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
CD40P25942 BEND3P1-201ENST00000421591 1944 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms