Protein–RNA interactions for Protein: A6NCE7

MAP1LC3B2, Microtubule-associated proteins 1A/1B light chain 3 beta 2, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B2A6NCE7 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC098850.1-201ENST00000419919 790 ntBASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 UPF3AP3-201ENST00000420996 769 ntBASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC132192.2-201ENST00000596206 1147 ntBASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AL450468.2-201ENST00000565955 1889 ntBASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC134312.5-201ENST00000568031 1313 ntBASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
MAP1LC3B2A6NCE7 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AC007336.3-201ENST00000623886 2160 ntBASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AC012441.1-201ENST00000446669 685 ntBASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AC087164.2-201ENST00000624514 3130 ntBASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 AC009533.1-201ENST00000539757 3158 ntBASIC10.79□□□□□ -0.68
MAP1LC3B2A6NCE7 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms