Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 SNORA50D-201ENST00000408059 134 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC092570.1-201ENST00000414446 469 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 PHBP10-201ENST00000416467 784 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC025594.1-201ENST00000469533 543 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 RN7SL605P-201ENST00000577229 281 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 SNORA50D-202ENST00000627561 132 ntBASIC18.34■□□□□ 0.53
CGNL1Q0VF96 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CGNL1Q0VF96 AC091807.1-201ENST00000418838 1544 ntBASIC18.33■□□□□ 0.53
CGNL1Q0VF96 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 ZSCAN5DP-201ENST00000600684 1488 ntBASIC18.33■□□□□ 0.53
CGNL1Q0VF96 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 AK2-208ENST00000487289 920 ntTSL 2 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 AP001120.3-201ENST00000585729 489 ntBASIC18.33■□□□□ 0.53
CGNL1Q0VF96 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGNL1Q0VF96 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CGNL1Q0VF96 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 AL137784.3-201ENST00000623858 2288 ntBASIC18.32■□□□□ 0.52
CGNL1Q0VF96 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CGNL1Q0VF96 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms