Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AQP7P3-201ENST00000624547 1041 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC002472.4-201ENST00000641915 272 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 AC073548.1-201ENST00000624088 1882 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 SALL4P6-201ENST00000429385 1691 ntBASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NPIPA3F8WFD2 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 NCLP1-201ENST00000445357 1963 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ABCD1P4-201ENST00000399687 604 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 RN7SL494P-201ENST00000461517 304 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC090136.2-201ENST00000517809 420 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC141586.1-203ENST00000567242 366 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 MIR497HG-202ENST00000572453 3838 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 MARK2P9-201ENST00000430958 1727 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 PES1P2-201ENST00000449745 1735 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC009474.1-201ENST00000455096 1565 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC011481.3-201ENST00000623895 5594 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 AC073869.1-201ENST00000415574 2762 ntBASIC12.47□□□□□ -0.41
NPIPA3F8WFD2 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPA3F8WFD2 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 477.1 ms