Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AC106827.1-201ENST00000366454 431 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 LINC00265-2P-201ENST00000413372 782 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 PPP1R2P4-201ENST00000424051 595 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 ACTBP11-201ENST00000436287 1126 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 PFN1P12-201ENST00000455938 534 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AL645939.5-201ENST00000606834 243 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AL021707.6-201ENST00000609212 491 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 AL645937.6-201ENST00000641122 3727 ntBASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLDN22Q8N7P3 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TBC1D27-202ENST00000424239 1573 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TRIM80P-201ENST00000455685 2848 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AL031432.4-201ENST00000641729 2190 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 HNRNPLP1-201ENST00000421896 1501 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC138761.6-201ENST00000583997 1423 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC016700.1-201ENST00000429424 312 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC132825.4-202ENST00000578792 434 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MIR4538-201ENST00000581377 78 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AP001462.1-201ENST00000594089 452 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AL022328.3-201ENST00000607943 679 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AL805961.1-203ENST00000641078 1258 ntBASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CLDN22Q8N7P3 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms