Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CLK1P49759 AC018735.1-201ENST00000437208 1502 ntBASIC12.98□□□□□ -0.33
CLK1P49759 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CLK1P49759 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 AC007952.5-201ENST00000572818 1486 ntBASIC12.97□□□□□ -0.33
CLK1P49759 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CLK1P49759 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.97□□□□□ -0.33
CLK1P49759 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.97□□□□□ -0.33
CLK1P49759 AK2P2-201ENST00000439142 405 ntBASIC12.97□□□□□ -0.33
CLK1P49759 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 OR2R1P-201ENST00000441404 914 ntBASIC12.97□□□□□ -0.33
CLK1P49759 AC091804.1-201ENST00000486888 567 ntBASIC12.97□□□□□ -0.33
CLK1P49759 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 MIR3188-201ENST00000583494 85 ntBASIC12.97□□□□□ -0.33
CLK1P49759 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 MIR6869-201ENST00000619434 62 ntBASIC12.97□□□□□ -0.33
CLK1P49759 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CLK1P49759 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.97□□□□□ -0.33
CLK1P49759 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CLK1P49759 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 CCT8L1P-201ENST00000465400 1674 ntBASIC12.96□□□□□ -0.33
CLK1P49759 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 AP003969.2-201ENST00000623739 2275 ntBASIC12.96□□□□□ -0.33
CLK1P49759 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.96□□□□□ -0.33
CLK1P49759 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CLK1P49759 AC108725.1-201ENST00000495472 409 ntBASIC12.96□□□□□ -0.33
CLK1P49759 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.96□□□□□ -0.33
CLK1P49759 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.96□□□□□ -0.33
CLK1P49759 AP001258.2-201ENST00000529891 490 ntBASIC12.96□□□□□ -0.33
CLK1P49759 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.96□□□□□ -0.33
CLK1P49759 FAM95B1-212ENST00000592873 4692 ntBASIC12.96□□□□□ -0.33
CLK1P49759 AL118558.3-201ENST00000607414 1079 ntBASIC12.96□□□□□ -0.33
CLK1P49759 AC100757.4-201ENST00000626934 759 ntBASIC12.96□□□□□ -0.33
CLK1P49759 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.96□□□□□ -0.33
CLK1P49759 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms