Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
COL15A1P39059 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.96■□□□□ 0.31
COL15A1P39059 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
COL15A1P39059 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC16.96■□□□□ 0.31
COL15A1P39059 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL15A1P39059 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL15A1P39059 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL15A1P39059 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL15A1P39059 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL15A1P39059 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 OR2T32P-201ENST00000403423 963 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 AL121994.1-201ENST00000413189 402 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 AL954722.1-201ENST00000431238 259 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 SRP9P1-201ENST00000445874 261 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 RN7SL794P-201ENST00000469816 280 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 AC022447.5-201ENST00000504817 392 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 MSNP1-201ENST00000511640 1732 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 AL031590.1-202ENST00000641466 1737 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL15A1P39059 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 DLX4-206ENST00000611342 1662 ntBASIC16.95■□□□□ 0.3
COL15A1P39059 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL15A1P39059 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.95■□□□□ 0.3
COL15A1P39059 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL15A1P39059 AC008040.5-201ENST00000599781 1781 ntBASIC16.94■□□□□ 0.3
COL15A1P39059 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.94■□□□□ 0.3
COL15A1P39059 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 AC024475.2-201ENST00000312173 879 ntBASIC16.94■□□□□ 0.3
COL15A1P39059 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC16.94■□□□□ 0.3
COL15A1P39059 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.94■□□□□ 0.3
COL15A1P39059 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 IGHVII-33-1-201ENST00000524010 280 ntBASIC16.94■□□□□ 0.3
COL15A1P39059 MYL6-215ENST00000549566 685 ntTSL 2 BASIC16.94■□□□□ 0.3
COL15A1P39059 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 CICP4-201ENST00000447359 2812 ntBASIC16.94■□□□□ 0.3
COL15A1P39059 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC16.94■□□□□ 0.3
COL15A1P39059 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC16.94■□□□□ 0.3
COL15A1P39059 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL15A1P39059 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms