Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 AC234783.1-201ENST00000441761 496 ntBASIC15.61■□□□□ 0.09
CLCN1P35523 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 AC007688.1-201ENST00000475592 759 ntBASIC15.61■□□□□ 0.09
CLCN1P35523 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CLCN1P35523 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.61■□□□□ 0.09
CLCN1P35523 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 AC079316.1-201ENST00000548397 411 ntBASIC15.61■□□□□ 0.09
CLCN1P35523 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 TMBIM7P-202ENST00000641474 1516 ntBASIC15.61■□□□□ 0.09
CLCN1P35523 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLCN1P35523 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLCN1P35523 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCN1P35523 MED24-201ENST00000356271 3446 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCN1P35523 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCN1P35523 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCN1P35523 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.6■□□□□ 0.09
CLCN1P35523 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 AC005034.1-201ENST00000426657 489 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCN1P35523 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCN1P35523 ACA64.2-201ENST00000459014 129 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.6■□□□□ 0.09
CLCN1P35523 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 AC023310.1-201ENST00000554836 735 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 DUX4L46-201ENST00000566845 751 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.6■□□□□ 0.09
CLCN1P35523 AC132192.2-201ENST00000596206 1147 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CLCN1P35523 AL035252.4-201ENST00000624174 288 ntBASIC15.6■□□□□ 0.09
CLCN1P35523 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC15.6■□□□□ 0.09
CLCN1P35523 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCN1P35523 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
CLCN1P35523 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLCN1P35523 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
CLCN1P35523 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLCN1P35523 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.59■□□□□ 0.09
CLCN1P35523 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLCN1P35523 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms