Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TPM3P06753 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC15.39■□□□□ 0.05
TPM3P06753 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TPM3P06753 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TPM3P06753 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TPM3P06753 AC138028.6-201ENST00000616106 1482 ntBASIC15.39■□□□□ 0.05
TPM3P06753 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TPM3P06753 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
TPM3P06753 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TPM3P06753 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.38■□□□□ 0.05
TPM3P06753 AC079178.1-201ENST00000420915 656 ntBASIC15.38■□□□□ 0.05
TPM3P06753 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.38■□□□□ 0.05
TPM3P06753 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.38■□□□□ 0.05
TPM3P06753 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.38■□□□□ 0.05
TPM3P06753 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.38■□□□□ 0.05
TPM3P06753 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.38■□□□□ 0.05
TPM3P06753 AC027307.3-201ENST00000594262 1100 ntBASIC15.38■□□□□ 0.05
TPM3P06753 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TPM3P06753 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 AC104590.1-202ENST00000558368 1921 ntBASIC15.38■□□□□ 0.05
TPM3P06753 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.38■□□□□ 0.05
TPM3P06753 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.38■□□□□ 0.05
TPM3P06753 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TPM3P06753 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 AC018629.1-201ENST00000623381 1736 ntBASIC15.37■□□□□ 0.05
TPM3P06753 AC092139.4-201ENST00000624318 2794 ntBASIC15.37■□□□□ 0.05
TPM3P06753 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TPM3P06753 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 CRB3P1-201ENST00000449338 276 ntBASIC15.37■□□□□ 0.05
TPM3P06753 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
TPM3P06753 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.37■□□□□ 0.05
TPM3P06753 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.37■□□□□ 0.05
TPM3P06753 AL162426.1-201ENST00000624141 743 ntBASIC15.37■□□□□ 0.05
TPM3P06753 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.37■□□□□ 0.05
TPM3P06753 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 AC020763.3-201ENST00000625095 2904 ntBASIC15.37■□□□□ 0.05
TPM3P06753 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 AF013593.1-201ENST00000458074 1487 ntBASIC15.37■□□□□ 0.05
TPM3P06753 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 MAX-212ENST00000555932 1673 ntTSL 5 BASIC15.37■□□□□ 0.05
TPM3P06753 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.37■□□□□ 0.05
TPM3P06753 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TPM3P06753 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TPM3P06753 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC15.36■□□□□ 0.05
TPM3P06753 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC15.36■□□□□ 0.05
TPM3P06753 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms