Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL591926.3-201ENST00000611630 238 ntBASIC11.5□□□□□ -0.57
CD74P04233 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
CD74P04233 AJ011932.1-201ENST00000621707 465 ntBASIC11.5□□□□□ -0.57
CD74P04233 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CD74P04233 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.5□□□□□ -0.57
CD74P04233 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.5□□□□□ -0.57
CD74P04233 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 PIN1P1-201ENST00000412108 996 ntBASIC11.49□□□□□ -0.57
CD74P04233 AC006987.1-201ENST00000413610 527 ntBASIC11.49□□□□□ -0.57
CD74P04233 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.49□□□□□ -0.57
CD74P04233 AC007389.4-201ENST00000454674 793 ntBASIC11.49□□□□□ -0.57
CD74P04233 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 AC007551.1-201ENST00000457394 519 ntBASIC11.49□□□□□ -0.57
CD74P04233 RN7SL277P-201ENST00000481521 288 ntBASIC11.49□□□□□ -0.57
CD74P04233 SLC25A15P3-201ENST00000505530 290 ntBASIC11.49□□□□□ -0.57
CD74P04233 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 AL137779.3-201ENST00000553295 729 ntBASIC11.49□□□□□ -0.57
CD74P04233 GREM1-201ENST00000560677 623 ntTSL 4 BASIC11.49□□□□□ -0.57
CD74P04233 MIR3615-201ENST00000581999 87 ntBASIC11.49□□□□□ -0.57
CD74P04233 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 AC120114.4-201ENST00000623731 2194 ntBASIC11.49□□□□□ -0.57
CD74P04233 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC11.49□□□□□ -0.57
CD74P04233 DDC-212ENST00000615193 1674 ntTSL 3 BASIC11.49□□□□□ -0.57
CD74P04233 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CD74P04233 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CD74P04233 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms