Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.15□□□□□ -0.46
CTLA4P16410 GRPEL2P1-201ENST00000453145 339 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.15□□□□□ -0.46
CTLA4P16410 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CTLA4P16410 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.15□□□□□ -0.46
CTLA4P16410 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 RN7SL574P-201ENST00000581512 297 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 AL353770.1-201ENST00000614915 403 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 AC007718.1-201ENST00000621078 280 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 GPR182-203ENST00000622922 591 ntBASIC12.15□□□□□ -0.46
CTLA4P16410 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.15□□□□□ -0.46
CTLA4P16410 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CTLA4P16410 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.15□□□□□ -0.46
CTLA4P16410 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CTLA4P16410 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CTLA4P16410 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.15□□□□□ -0.46
CTLA4P16410 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
CTLA4P16410 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CTLA4P16410 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
CTLA4P16410 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CTLA4P16410 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.14□□□□□ -0.47
CTLA4P16410 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CTLA4P16410 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.14□□□□□ -0.47
CTLA4P16410 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
CTLA4P16410 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 PYY2-201ENST00000315776 282 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
CTLA4P16410 DKKL1P1-201ENST00000400550 698 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 CALR4P-201ENST00000431943 946 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.14□□□□□ -0.47
CTLA4P16410 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.14□□□□□ -0.47
CTLA4P16410 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
CTLA4P16410 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.14□□□□□ -0.47
CTLA4P16410 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.14□□□□□ -0.47
CTLA4P16410 AC132812.1-201ENST00000583145 892 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 AP005264.5-201ENST00000590066 467 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.14□□□□□ -0.47
CTLA4P16410 AC012073.1-201ENST00000606114 1108 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.14□□□□□ -0.47
CTLA4P16410 AC091769.1-201ENST00000619576 568 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
CTLA4P16410 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.14□□□□□ -0.47
CTLA4P16410 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CTLA4P16410 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
CTLA4P16410 AL513497.1-201ENST00000624273 2083 ntBASIC12.14□□□□□ -0.47
CTLA4P16410 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CTLA4P16410 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CTLA4P16410 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CTLA4P16410 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CTLA4P16410 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
CTLA4P16410 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC12.13□□□□□ -0.47
CTLA4P16410 HSPA8P9-201ENST00000485881 1943 ntBASIC12.13□□□□□ -0.47
CTLA4P16410 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms