Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PFN1P12-201ENST00000455938 534 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 ZNF767P-206ENST00000513792 565 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 PIGCP1-201ENST00000527583 895 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AC026803.1-201ENST00000569130 274 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 RN7SL774P-201ENST00000577467 290 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 SIGLEC22P-201ENST00000599104 714 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 AC124319.4-201ENST00000622931 2161 ntBASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDKAL1Q5VV42 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL122018.1-201ENST00000446607 2310 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 GBAP1-208ENST00000566701 1546 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 BRWD1P1-201ENST00000401091 371 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 HNRNPA1P33-201ENST00000421426 561 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL008707.1-201ENST00000422498 534 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AC026320.2-201ENST00000434379 478 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 SCARNA12-201ENST00000459155 270 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 RN7SL258P-201ENST00000478664 300 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 SRP19-206ENST00000515463 660 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AC009560.1-201ENST00000620208 434 ntBASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDKAL1Q5VV42 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDKAL1Q5VV42 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms