Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.79□□□□□ -0.52
CD40P25942 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC11.79□□□□□ -0.52
CD40P25942 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC11.79□□□□□ -0.52
CD40P25942 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 FKBP4P8-201ENST00000610931 1369 ntBASIC11.79□□□□□ -0.52
CD40P25942 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CD40P25942 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.79□□□□□ -0.52
CD40P25942 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
CD40P25942 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 STRCP1-201ENST00000509801 5328 ntBASIC11.78□□□□□ -0.52
CD40P25942 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 NHP2-202ENST00000314397 599 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CD40P25942 AC022080.1-201ENST00000366255 781 ntBASIC11.78□□□□□ -0.52
CD40P25942 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 VENTXP4-201ENST00000449029 958 ntBASIC11.78□□□□□ -0.52
CD40P25942 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 AC087203.1-201ENST00000532111 1181 ntBASIC11.78□□□□□ -0.52
CD40P25942 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.78□□□□□ -0.52
CD40P25942 FAM187B2P-201ENST00000577135 713 ntBASIC11.78□□□□□ -0.52
CD40P25942 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CD40P25942 TYMSP2-201ENST00000589501 424 ntBASIC11.78□□□□□ -0.52
CD40P25942 AC137723.2-201ENST00000623540 398 ntBASIC11.78□□□□□ -0.52
CD40P25942 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 AC073957.3-201ENST00000609998 6758 ntBASIC11.78□□□□□ -0.52
CD40P25942 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.78□□□□□ -0.52
CD40P25942 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CD40P25942 ABCD1P2-201ENST00000429313 1601 ntBASIC11.78□□□□□ -0.52
CD40P25942 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CD40P25942 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms