Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPA3F8WFD2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
NPIPA3F8WFD2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 AP000354.1-201ENST00000396982 456 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 MIR1307-201ENST00000408840 149 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 AC012073.1-201ENST00000606114 1108 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FUCA1P1-201ENST00000374476 1351 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A21P-201ENST00000510875 1396 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A15P-201ENST00000514465 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A6P-201ENST00000515148 1394 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A16P-201ENST00000526662 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A9P-201ENST00000527940 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A5P-201ENST00000528738 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A14P-201ENST00000530386 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 FAM90A13P-201ENST00000534703 1395 ntBASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
NPIPA3F8WFD2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AL365181.1-201ENST00000564032 1828 ntBASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
NPIPA3F8WFD2 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms