Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 EEF1GP8-201ENST00000506566 1154 ntBASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 COQ10BP2-201ENST00000513804 724 ntBASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.32■□□□□ 0.2
CLIP2Q9UDT6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 PEG13-201ENST00000631594 5667 ntBASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 OR2W2P-201ENST00000406313 909 ntBASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 BATF-202ENST00000555504 361 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 AC012073.1-201ENST00000606114 1108 ntBASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIP2Q9UDT6 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MIR1307-201ENST00000408840 149 ntBASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 RN7SL23P-201ENST00000484055 275 ntBASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIP2Q9UDT6 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms