Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SHROOM3Q8TF72 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 EIF5AP2-201ENST00000585668 1047 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC007250.1-201ENST00000608934 338 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 MIR6816-201ENST00000620368 66 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC233280.19-201ENST00000633223 136 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 PCDHB19P-202ENST00000625133 2914 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC004837.1-201ENST00000446267 564 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC018463.1-201ENST00000456674 917 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC008040.5-201ENST00000599781 1781 ntBASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHROOM3Q8TF72 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 SNORD23-201ENST00000408876 110 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC100858.1-201ENST00000514059 1228 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AL009176.1-201ENST00000607876 650 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC092115.1-201ENST00000566277 1402 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC108734.2-201ENST00000420887 1069 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 RN7SL351P-201ENST00000469306 248 ntBASIC13.91□□□□□ -0.18
SHROOM3Q8TF72 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms