Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 TFAM-201ENST00000373895 973 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 HMGN1P4-201ENST00000419500 290 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 GAPDHP65-201ENST00000425487 1006 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CXXC1P1-202ENST00000489409 1212 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RPL29P2-202ENST00000498671 657 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AC010395.2-201ENST00000509899 904 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 RAB42P1-201ENST00000555078 316 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 MIR4326-201ENST00000582203 59 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CALM3-206ENST00000594523 540 ntTSL 4 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RSPO4Q2I0M5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 SERF2-205ENST00000403425 690 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AL121994.1-201ENST00000413189 402 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 LDHAL6CP-201ENST00000502352 1142 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 RN7SL134P-201ENST00000579756 303 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MIR4526-201ENST00000583168 87 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AC009779.7-201ENST00000609031 469 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 AL139424.2-202ENST00000641335 1369 ntBASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RSPO4Q2I0M5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
RSPO4Q2I0M5 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RSPO4Q2I0M5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms