Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC13.67□□□□□ -0.22
CSNK1DP48730 AC008972.2-201ENST00000606587 494 ntBASIC13.67□□□□□ -0.22
CSNK1DP48730 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.67□□□□□ -0.22
CSNK1DP48730 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.67□□□□□ -0.22
CSNK1DP48730 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CSNK1DP48730 KRT8P25-201ENST00000473150 1456 ntBASIC13.67□□□□□ -0.22
CSNK1DP48730 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.67□□□□□ -0.22
CSNK1DP48730 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1DP48730 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 CICP9-201ENST00000444451 1913 ntBASIC13.66□□□□□ -0.22
CSNK1DP48730 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1DP48730 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CSNK1DP48730 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.66□□□□□ -0.22
CSNK1DP48730 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1DP48730 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 RPL29P2-202ENST00000498671 657 ntBASIC13.66□□□□□ -0.22
CSNK1DP48730 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.66□□□□□ -0.22
CSNK1DP48730 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1DP48730 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.66□□□□□ -0.22
CSNK1DP48730 MIR5196-201ENST00000578146 115 ntBASIC13.66□□□□□ -0.22
CSNK1DP48730 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CSNK1DP48730 MIR4750-201ENST00000584564 56 ntBASIC13.66□□□□□ -0.22
CSNK1DP48730 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CSNK1DP48730 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CSNK1DP48730 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CSNK1DP48730 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.65□□□□□ -0.22
CSNK1DP48730 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.65□□□□□ -0.22
CSNK1DP48730 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSNK1DP48730 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms