Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
APOBEC1P41238 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APOBEC1P41238 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
APOBEC1P41238 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC002350.2-201ENST00000623894 1828 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 RNVU1-8-201ENST00000364272 125 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 ACTBP14-201ENST00000411655 1089 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.42□□□□□ -0.42
APOBEC1P41238 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 KRT18P62-201ENST00000446618 1287 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.42□□□□□ -0.42
APOBEC1P41238 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC100858.1-201ENST00000514059 1228 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 RNA5SP417-201ENST00000516459 108 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 AL132994.1-201ENST00000554098 400 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.42□□□□□ -0.42
APOBEC1P41238 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC132812.1-201ENST00000583145 892 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC084781.1-201ENST00000613737 656 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 LINC00244-201ENST00000625073 613 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 AC117503.4-201ENST00000623229 1418 ntBASIC12.42□□□□□ -0.42
APOBEC1P41238 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APOBEC1P41238 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APOBEC1P41238 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
APOBEC1P41238 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
APOBEC1P41238 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC12.41□□□□□ -0.42
APOBEC1P41238 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.41□□□□□ -0.42
APOBEC1P41238 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.41□□□□□ -0.42
APOBEC1P41238 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 RN7SKP109-201ENST00000410592 316 ntBASIC12.41□□□□□ -0.42
APOBEC1P41238 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBEC1P41238 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.41□□□□□ -0.42
APOBEC1P41238 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBEC1P41238 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms